| Detailed Information for Phage Naira |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Steen Grundy |
| Year Found | 2017 |
| Location Found | Auckland, New Zealand |
| Finding Institution | Massey University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 36.734195 S, 174.700783 E Map |
| Discovery Notes | Found in compost bins of Massey Albany campus. Same location as at least 2 other bacteriophages.All of these were discovered by Anezka Hoskin. |
| Naming Notes | This phage was named after Naira Salavatova another Massey university student who was also at the same school as the reasearcher (Glenfield College). |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 7, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 649 |
| Genome length (bp) | 53581 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGATGGTAA |
| GC Content | 63.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | A |
| Subcluster | A1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Massey University |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques were fairly large and clear. |
| Morphotype | Siphoviridae |
| Number of Genes | 96 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK524523 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
2.50 x 10^13 |
| Date of SEA Lysate Titering |
Jul 4, 2017 |
| Pitt Freezer Box# |
164 |
| Pitt Freezer Box Grid# |
A10 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
