Mycobacterium phage OKCentral2016
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Liberone (GI) Neuvillette (FR) FatCactus (A20) Rossetti (L2) RoseMarie (None)Mycobacterium phage OKCentral2016
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| Detailed Information for Phage OKCentral2016 | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Former names | OKcentral2016a |
| Found By | Christopher Patton and Hari Kotturi |
| Year Found | 2016 |
| Location Found | Edmond, OK USA |
| Finding Institution | University of Central Oklahoma |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 35.653371 N, 97.474118 W Map |
| Discovery Notes | The soil is collected from South-West corner of the University of Central Oklahoma campus in front of Coyner Health Science building. The soil is usually moist, never exposed to direct sunlight, and with minimum human movement. |
| Naming Notes | OK – Oklahoma Central – Soil from the University of Central Oklahoma campus 2016 – Year of isolation |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 31, 2017 |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 121165 |
| Genome length (bp) | 50072 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGCCGGTAA |
| GC Content | 65.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | A |
| Subcluster | A10 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 83 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MF773750 |
| Refseq Number | None yet |
| Published in Paper | Patton et al 2018, Genome Announcements: Genomic Sequence of Mycobacteriophage OKCentral2016 |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 72 |
| Pitt Freezer Box Grid# | B12 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |