| Detailed Information for Phage Phaded |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Sai Kaushik Yeturu |
| Year Found | 2017 |
| Location Found | Providence, RI USA |
| Finding Institution | Brown University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 18°C |
| GPS Coordinates | 41.823833 N, 71.403537 W Map |
| Discovery Notes | This phage was discovered at a depth of 2 inches below a grassy surface in moist conditions with an atmospheric temperature of 18.3 degrees C on 9/19/17. The phage was isolated through enrichment on 9/20/17. |
| Naming Notes | The name of this phage stems from the colloquial use of the term "Faded" in modern culture and "Ph" from Phage. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 18, 2018 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 735 |
| Genome length (bp) | 53598 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGTCGGTTA |
| GC Content | 63.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | A |
| Subcluster | A2 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Rockland Community College |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are Turbid and have a concentric ring that is additionally turbid. |
| Morphotype | Siphoviridae |
| Number of Genes | 88 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN703408 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
54 |
| Pitt Freezer Box Grid# |
B7 |
| Available Files |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |