Detailed Information for Phage Polyphemus |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Dan Walsh, Stanley Hollinger-Levitsky |
Year Found | 2024 |
Location Found | Edinburg, ME United States of America |
Finding Institution | University of Maine, Honors College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 45.19028 N, 68.62829 W Map |
Discovery Notes | Soil sample collected from garden bed. |
Naming Notes | Polyphemus is the one-eyed giant son of Poseidon and Thoosa in Greek mythology, one of the Cyclopes described in Homer's Odyssey. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 4, 2025 |
Sequencing Facility | Hubbard Center for Genome Studies at the University of New Hampshire |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NovaSeq X Plus |
Read Type | Single-end reads |
Read Length | 250 bp |
Approximate Shotgun Coverage | 36221 |
Genome length (bp) | 50424 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGTCGGTTA |
GC Content | 61.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A6 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Maine, Honors College |
Annotation Status | QC Complete |
Plaque Notes | Turbid |
Morphotype | Siphoviridae |
Number of Genes | 91 |
Number of tRNAs | 3 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
199 |
Pitt Freezer Box Grid# |
D2 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |