Mycobacterium phage Sabinator
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| Detailed Information for Phage Sabinator | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Former names | Sabinator88 |
| Found By | Devin Sabin |
| Year Found | 2009 |
| Location Found | Provo Canyon, UT USA |
| Finding Institution | Brigham Young University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.339683 N, 111.605483 W Map |
| Discovery Notes | Found on 1 Sep. 2009 at 3:00 p.m. Approx. temp. was 65°. The sample was from a dry ditch at the base of a tree with a depth of three inches. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 4, 2014 |
| Sequencing Facility | BYU DNA Sequencing Center |
| Shotgun Sequencing Method | 454 |
| Sequencer Used | 454 Genome Sequencer FLX |
| Approximate Shotgun Coverage | 349 |
| Genome length (bp) | 50883 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGGTGGTAA |
| GC Content | 64.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | A |
| Subcluster | A3 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | turbid concentric circles at approx. 3mm in diameter. |
| Morphotype | Siphoviridae |
| Number of Genes | 88 |
| Number of tRNAs | 3 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Submitted Annotation in DNA Master Format | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KX808129 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Designator | 2009BRYOsabinator88DS |
| SEA Lysate Titer | unknown |
| Pitt Freezer Box# | 1 |
| Pitt Freezer Box Grid# | 5 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |
