Mycobacterium phage Wander
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Detailed Information for Phage Wander
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMalayna Hocker
Year Found2011
Location FoundNorthampton, MA USA
Finding InstitutionSmith College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.318022 N, 72.639269 W Map
Discovery NotesFound at the base of Paeonia Lactiflora (Albert Crousse Tree) in mulch. Partial sunlight. Approximately 4 cm deep. Irrigated lands.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 27, 2013
Sequencing FacilitySmith College
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1934
Genome length (bp)51366
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCCGGTAA
GC Content63.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterA
SubclusterA4
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionSmith College
Annotation StatusIn GenBank
Plaque NotesSmall plaque size, circular, mostly clear but occasionally light cloud. Consistent in quality, but sometimes plaques smaller than usual.
MorphotypeSiphoviridae
Number of Genes88
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMG944224
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
SEA Designator SMTH
Pitt Freezer Box# 27
Pitt Freezer Box Grid# 23
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload