Mycobacterium phage JewelBug
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Detailed Information for Phage JewelBug
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByRobert Agee
Year Found2012
Location FoundWest Lafayette, IN USA
Finding InstitutionPurdue University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.42208 N, 86.917246 W Map
Discovery NotesFrom construction site at Purdue University next to Hansen Life Sciences and Lily Hall.
8/24/12
2:00 pm
Soil was mildly wet and clumpy. Approx. 24cm below surface.
Naming NotesMother's nickname
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 13, 2013
Sequencing FacilityPurdue Genomics Facility
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage500
Genome length (bp)50341
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGTCGGTTA
GC Content61.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterA
SubclusterA6
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionPurdue University
Annotation StatusIn GenBank
Plaque NotesCloudy plaques approximately .5 to 1cm in diameter.
MorphotypeSiphoviridae
Number of Genes91
Number of tRNAs3
Number of tmRNAs0
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359352
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 39
Pitt Freezer Box Grid# 63
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload