| Detailed Information for Phage Jordennis |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | JorDonna Frazier |
| Year Found | 2015 |
| Location Found | Upper Marlboro, MD USA |
| Finding Institution | Lincoln University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 38.818964, -76.750010 Map |
| Discovery Notes | The soil was collected September 7, 2015. The soil was light and dry. It was top soil. It had not rained for a few days. It was 83 degrees Fahrenheit. |
| Naming Notes | This is my sister's nickname for me when I am not being as nice as I should be. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 6, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 2238 |
| Genome length (bp) | 52234 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGTCGGTTA |
| GC Content | 61.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | A |
| Subcluster | A6 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Hampden-Sydney College |
| Annotation Status | In GenBank |
| Plaque Notes | The plaque is polymorphic. The plaques varies between large and small. They resemble a bulls-eye,meaning clear in the center and cloudy around the center. |
| Morphotype | Siphoviridae |
| Number of Genes | 96 |
| Number of tRNAs | 3 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK494090 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
