| Detailed Information for Phage Oofda |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Makayla Melendez and Nicholette Stewart |
| Year Found | 2018 |
| Location Found | Monroe, LA USA |
| Finding Institution | University of Louisiana at Monroe |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 32.54028 N, 92.11278 W Map |
| Discovery Notes | Wet dirt found under large Chinese Tallow tree. |
| Naming Notes | Oofda is an exclamation or interjection expressing bafflement, surprise, or dismay. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 10, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 66 |
| Genome length (bp) | 52551 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGGTGGTTA |
| GC Content | 62.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | A |
| Subcluster | A15 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of Louisiana at Monroe |
| Annotation Status | QC Complete |
| Plaque Notes | Plaques were medium-sized and clear. |
| Morphotype | Siphoviridae |
| Number of Genes | 96 |
| Number of tRNAs | 4 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
79 |
| Pitt Freezer Box Grid# |
B12 |
| Available Files |
| GenBank File for Phamerator | Download |