Detailed Information for Phage Snickers |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Haya Eldana |
Year Found | 2020 |
Location Found | Dearborn Heights, MI United States |
Finding Institution | University of Detroit Mercy |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 42.35425 N, 83.298614 W Map |
Discovery Notes | The weather was hot, the sand was collected from a sunny area from the front lawn. The sand I collected was very sandy. |
Naming Notes | Snickers is my favorite chocolate that, I named my phage after my favorite chocolate. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 21, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 148 |
Genome length (bp) | 50824 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGGTGGTAA |
GC Content | 64.0% |
Sequencing Notes | consensus sequence has a 3716 bp deletion of 75% of reads from 45646 - 49361 bp |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | A |
Subcluster | A3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Mitchell Community College |
Annotation Status | Awaiting_QC |
Plaque Notes | Lytic |
Morphotype | Siphoviridae |
Number of Genes | 85 |
Number of tRNAs | 3 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
130 |
Pitt Freezer Box Grid# |
F10 |