Mycobacterium phage TinyPebbles
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Detailed Information for Phage TinyPebbles
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByEmma
Year Found2024
Location FoundDuluth, MN USA
Finding InstitutionCollege of St. Scholastica
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature37°C
GPS Coordinates46.818838 N, 92.058842 W Map
Discovery NotesFound at Congdon Park in Duluth Minnesota slightly off of trail. Near bush by 2nd bridge when traveling North West on the lower half of the park.
Naming NotesMy dogs name is Pebbles and she is tiny
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 9, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage8666
Genome length (bp)50900
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGGTGGTAA
GC Content64.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterA
SubclusterA3
Cluster Life CycleTemperate
Other Cluster Members

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Acme (A1)

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Alsfro (A1)

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Chanagan (A1)

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Dulcie (A1)

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Edtherson (A1)

EnzoK (A1)

Espresso (A1)

Euphoria (A1)

Eyeball (A1)

Fajezeel (A1)

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Francis47 (A1)

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Gachnar (A1)

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Graduation (A1)

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Museum (A1)

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Niza (A1)

Norz (A1)

Ohno789 (A1)

Oogway (A1)

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Papez (A1)

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Pepe (A1)

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Rhynn (A1)

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Sandaddy (A1)

Sanya (A1)

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Seanderson (A1)

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TheloniousMonk (A1)

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Topgun (A1)

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Traft412 (A1)

Treddle (A1)

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Wheeler (A1)

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Chupacabra (A10)

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Drake94 (A10)

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Edison31 (A10)

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Kristoff (A10)

OKCentral2016 (A10)

PeaceMeal1 (A10)

Poompha (A10)

Rebeuca (A10)

RhynO (A10)

Rowdy (A10)

Severus (A10)

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Topanga (A10)

Trike (A10)

Twister (A10)

WalterMcMickey (A10)

Aneem (A11)

Bachome (A11)

Bowtie (A11)

Bud (A11)

Ebony (A11)

Et2Brutus (A11)

Fibonacci (A11)

Flaverint (A11)

Gilberta (A11)

Hutc2 (A11)

Insomnia (A11)

Jabith (A11)

Joselito (A11)

Kimba (A11)

Lucivia (A11)

Mabel (A11)

MaCh (A11)

Mulciber (A11)

Munch (A11)

Orange (A11)

Petersenfast (A11)

Salz (A11)

Saskia (A11)

Sham4 (A11)

Snape (A11)

Timothy (A11)

TinyTimmy (A11)

Wolpertinger (A11)

DarthPhader (A12)

Pharaoh (A12)

Refuge (A12)

Steamy (A12)

Zimmer (A12)

Phlei (A13)

Gail (A14)

Jeeves (A14)

Luchador (A14)

SororFago (A14)

Sunhee (A14)

Anaysia (A15)

Anon (A15)

Battleship (A15)

Boohoo (A15)

DekHockey33 (A15)

Epsocamisio (A15)

JSwag (A15)

KatherineG (A15)

LastResort (A15)

Looper (A15)

MinecraftSteve (A15)

Nebulosus (A15)

Nedarya (A15)

Oofda (A15)

ReMo (A15)

Remus (A15)

Rosalind (A15)

ShayRa (A15)

Soups (A15)

Strosahl (A15)

Switzerland (A15)

Waits (A15)

Warrior24 (A15)

EagleEye (A16)

Lucyedi (A16)

PainterBoy (A16)

40AC (A17)

MyraDee (A18)

Kimona (A19)

20ES (A2)

AbbyPaige (A2)

Acolyte (A2)

Adzzy (A2)

Agape74 (A2)

AN3 (A2)

AN9 (A2)

ANI8 (A2)

AnnaL29 (A2)

Anselm (A2)

ArcherNM (A2)

BabyBack (A2)

Bactobuster (A2)

Baehexic (A2)

BengiVuitton (A2)

Benvolio (A2)

BiancaTri92 (A2)

BobSwaget (A2)

Bradman (A2)

Bugsy (A2)

Caraxes (A2)

Centaur (A2)

Changeling (A2)

Che12 (A2)

ChipMunk (A2)

Colin (A2)

CRB1 (A2)

Crucio (A2)

D29 (A2)

D32 (A2)

Dalmatian (A2)

DBQu4n (A2)

DeerParkTS (A2)

Deloris (A2)

Dignity (A2)

Drake55 (A2)

DudeLittle (A2)

Duplo (A2)

Echild (A2)

Equemioh13 (A2)

EvilGenius (A2)

EZMoney23 (A2)

Fameo (A2)

FiringLine (A2)

First (A2)

Flare16 (A2)

ForesterFrank (A2)

GaugeLDP (A2)

Georgie2 (A2)

Gratitude (A2)

HarryHoudini (A2)

Heffalump (A2)

Herbertwm (A2)

HippoHollow (A2)

IronMan (A2)

Iwokeuplikedis (A2)

Jaan (A2)

Jerm (A2)

JoshKayV (A2)

Journey13 (A2)

Jsquared (A2)

Kalpine (A2)

Kerberos (A2)

KingCyrus (A2)

Koduck (A2)

L5 (A2)

LadyBird (A2)

Landor (A2)

Larenn (A2)

Leogania (A2)

Leviathan (A2)

LilTurb (A2)

LionsBait (A2)

Lokk (A2)

Loser (A2)

MajorMajor (A2)

Malec (A2)

MiculUcigas (A2)

Miko (A2)

MissWhite (A2)

Naji (A2)

NaSiaTalie (A2)

NicoleTera (A2)

NothingSpecial (A2)

Odin (A2)

Ph8s (A2)

Phaded (A2)

Piro94 (A2)

Pomar16 (A2)

Power (A2)

Prudy (A2)

Pukovnik (A2)

QueenB2 (A2)

QueenBeesly (A2)

Quokka (A2)

Rachaly (A2)

RedRock (A2)

Retro23 (A2)

SemperFi (A2)

Serenity (A2)

Sknot (A2)

Smeagan (A2)

SnapTap (A2)

StarStuff (A2)

Superchunk (A2)

SweetiePie (A2)

SwirlSquare (A2)

TarsusIV (A2)

Terrific (A2)

TipsytheTRex (A2)

Tomathan (A2)

Travvers (A2)

Tristan (A2)

Trixie (A2)

Trooper (A2)

Turbido (A2)

Updawg (A2)

VA6 (A2)

VC3 (A2)

WeiHuaDA (A2)

Whabigail7 (A2)

WideWale (A2)

XianYue (A2)

Anthony (A20)

FatCactus (A20)

Kinmap (A21)

Chargerpower (A22)

ACFishhook (A3)

Aglet (A3)

AgronaGT15 (A3)

Anubis (A3)

AugsMagnumOpus (A3)

BabyJohn (A3)

BabyRay (A3)

Beauxregard13 (A3)

Bigflo (A3)

BlueBird (A3)

BreSam8 (A3)

Bugatti (A3)

BuzzBuzz (A3)

Bxz2 (A3)

Calvinny (A3)

Caviar (A3)

Chiqui (A3)

Clammy (A3)

Colbster (A3)

Cullens (A3)

DaHudson (A3)

Daishi (A3)

Dieselweasel (A3)

DropBear (A3)

EpicPhail (A3)

Farber (A3)

Fernando (A3)

Fred313 (A3)

Gemma (A3)

GingkoMaracino (A3)

Giroux (A3)

Grif (A3)

Groupthink (A3)

Grub (A3)

Grum1 (A3)

GtownJaz (A3)

Gwennie (A3)

HashRod (A3)

HaveUMetTed (A3)

Heathen (A3)

HelDan (A3)

Heliosoles (A3)

Hercules11 (A3)

Hookmount (A3)

Idleandcovert (A3)

Isca (A3)

JenCasNa (A3)

JeppNRM (A3)

JF2 (A3)

JF4 (A3)

JHC117 (A3)

Jobu08 (A3)

Kachowdy (A3)

KADY (A3)

Kalb97 (A3)

Kalnoky (A3)

Lambert1 (A3)

LarryKay (A3)

LBerry (A3)

Lilith (A3)

Louie6 (A3)

Lowa (A3)

LugYA (A3)

MA5 (A3)

MadMarie (A3)

Mainiac (A3)

Malinsilva (A3)

Manu (A3)

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Margo (A3)

Marie (A3)

Marius (A3)

MarQuardt (A3)

Methuselah (A3)

Microwolf (A3)

Misomonster (A3)

MK4 (A3)

MoneyMay (A3)

Montavir (A3)

MuchMore (A3)

Noella (A3)

Norbert (A3)

OlanP (A3)

Ollie (A3)

P28Green (A3)

Panamaxus (A3)

Pawn (A3)

Pembroke (A3)

Penny1 (A3)

PGHhamlin (A3)

Phantastic (A3)

PhishRPhriends (A3)

Phoebe (A3)

Phoxy (A3)

Phranny (A3)

Pistachio (A3)

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Popcicle (A3)

PotatoSplit (A3)

Puppy (A3)

PurpleHaze (A3)

QuinnKiro (A3)

Reba (A3)

ResDef (A3)

Rockstar (A3)

Rummer (A3)

Sabia (A3)

Sabinator (A3)

SaturnRing (A3)

Scout (A3)

Snickers (A3)

SoilDragon (A3)

Soshari (A3)

SoYo (A3)

Spike509 (A3)

Stagni (A3)

StepMih (A3)

Taurus (A3)

Texage (A3)

Tiffany (A3)

TinyPebbles (A3)

TNguyen7 (A3)

Todacoro (A3)

Veracruz (A3)

Vix (A3)

Watson (A3)

Wooldri (A3)

Zarafa (A3)

Zetzy (A3)

AbbysRanger (A4)

Abdiel (A4)

Achebe (A4)

Albee (A4)

Alberto7 (A4)

Annyong (A4)

Arturo (A4)

AvatarAhPeg (A4)

Avle17 (A4)

Baby16 (A4)

Backyardigan (A4)

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BellusTerra (A4)

Blackmoor (A4)

Bombshell (A4)

Broseidon (A4)

Bruiser (A4)

BubbleTrouble (A4)

Bumblebee11 (A4)

Burger (A4)

Caelakin (A4)

Camperdownii (A4)

CentreCat (A4)

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Chaph (A4)

Cici (A4)

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Citius (A4)

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HamSlice (A4)

Happiness (A4)

Holli (A4)

Houdini22 (A4)

Huxley (A4)

Iceman (A4)

ICleared (A4)

Iracema64 (A4)

Jaykayelowell (A4)

JetBlade (A4)

JoongJeon (A4)

Kampy (A4)

Katalie136 (A4)

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Kingmustik0402 (A4)

Koan (A4)

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Kratark (A4)

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Kyee (A4)

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Lemur (A4)

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LittleB (A4)

LittleGuy (A4)

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Lorenzo (A4)

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Maxo (A4)

Mayonnaise (A4)

Mazhar510 (A4)

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Melvin (A4)

Millski (A4)

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Morpher26 (A4)

Morrow (A4)

Mundrea (A4)

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Nemo27 (A4)

Noelle (A4)

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NotAPhaseMom (A4)

Nyxis (A4)

Obama12 (A4)

Ohfah (A4)

OKaNui (A4)

Palestino (A4)

Peaches (A4)

Perplexer (A4)

PeterPeter (A4)

PetiteSangsue (A4)

Phacado (A4)

Phelipe (A4)

Phighter1804 (A4)

Phontbonne (A4)

Pipcraft (A4)

Polymorphads (A4)

Pumbaa (A4)

Relief (A4)

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Romney (A4)

Roosevelt (A4)

Rosa24 (A4)

Ruin (A4)

Sabertooth (A4)

Scamp (A4)

SenorClean (A4)

Shaka (A4)

SheldonCooper (A4)

Shygu2 (A4)

Skipitt (A4)

Sparxx (A4)

Spino (A4)

Stasia (A4)

Stink (A4)

Sultana (A4)

Taquarus (A4)

Thanksgivukkah (A4)

TinaFeyge (A4)

Tinybot (A4)

TiroTheta9 (A4)

TroyPia (A4)

TygerBlood (A4)

Ulysses (A4)

Wander (A4)

Wilbur (A4)

Wile (A4)

Wizard007 (A4)

Xena (A4)

YoSam321 (A4)

AgentM (A5)

Airmid (A5)

Aragog (A5)

Archetta (A5)

Benedict (A5)

Bluefalcon (A5)

Bonamassa (A5)

Chadwick (A5)

Conspiracy (A5)

Coog (A5)

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Discoknowium (A5)

Dublin (A5)

ElTiger69 (A5)

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George (A5)

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HuhtaEnerson15 (A5)

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Lev2 (A5)

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Micasa (A5)

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Milcery (A5)

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PetterN (A5)

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Prinashe11 (A5)

Scorpia (A5)

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Artemis2UCLA (A6)

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Danforth (A8)

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Alma (A9)

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Sachima (A9)

Scherzo (A9)

SheaKeira (A9)

Spouty (A9)

Toaka (A9)

Tubs (A9)

Ugenie5 (A9)

Vanisoa (A9)

WorldCup (A9)

Yecey3 (A9)

Annotating InstitutionCollege of St. Scholastica
Annotation StatusIn GenBank
Plaque NotesCloudy plaques all slightly different in size, ranging from very small to about 4 millimeters.
MorphotypeSiphoviridae
Number of Genes89
Number of tRNAs3
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

TinyPebbles_1
(HNH endonuclease)

TinyPebbles_2
(terminase, small subunit)

TinyPebbles_3

TinyPebbles_4
(minor tail protein)

TinyPebbles_5
(minor tail protein)

TinyPebbles_6

TinyPebbles_7 — tRNA
(tRNA-Asn(gtt))

TinyPebbles_8 — tRNA
(tRNA-Trp(cca))

TinyPebbles_9 — tRNA
(tRNA-Leu(cag))

TinyPebbles_10

TinyPebbles_11
(lysin A)

TinyPebbles_12
(lysin B)

TinyPebbles_13
(terminase, large subunit)

TinyPebbles_14
(portal protein)

TinyPebbles_15
(capsid maturation protease)

TinyPebbles_16
(scaffolding protein)

TinyPebbles_17
(major capsid protein)

TinyPebbles_18

TinyPebbles_19
(head-to-tail adaptor)

TinyPebbles_20

TinyPebbles_21
(head-to-tail stopper)

TinyPebbles_22

TinyPebbles_23
(tail terminator)

TinyPebbles_24
(tail tube)

TinyPebbles_25
(tail assembly chaperone)

TinyPebbles_26
(tail assembly chaperone)

TinyPebbles_27
(tape measure protein)

TinyPebbles_28
(Dit)

TinyPebbles_29
(baseplate hub)

TinyPebbles_30

TinyPebbles_31

TinyPebbles_32

TinyPebbles_33
(tail spike)

TinyPebbles_34

TinyPebbles_35

TinyPebbles_36
(serine integrase)

TinyPebbles_37

TinyPebbles_38

TinyPebbles_39

TinyPebbles_40
(deoxycytidylate deaminase)

TinyPebbles_41

TinyPebbles_42

TinyPebbles_43

TinyPebbles_44

TinyPebbles_45

TinyPebbles_46

TinyPebbles_47
(DNA polymerase I)

TinyPebbles_48

TinyPebbles_49
(helix-turn-helix DNA binding domain)

TinyPebbles_50

TinyPebbles_51
(ThyX-like thymidylate synthase)

TinyPebbles_52

TinyPebbles_53
(ribonucleotide reductase)

TinyPebbles_54

TinyPebbles_55

TinyPebbles_56
(DNA binding protein)

TinyPebbles_57
(metallophosphatase)

TinyPebbles_58

TinyPebbles_59

TinyPebbles_60

TinyPebbles_61
(DNA primase)

TinyPebbles_62
(DNA primase)

TinyPebbles_63
(endonuclease VII)

TinyPebbles_64

TinyPebbles_65
(hydrolase)

TinyPebbles_66
(DprA-like ssDNA binding protein)

TinyPebbles_67

TinyPebbles_68
(DnaB-like dsDNA helicase)

TinyPebbles_69

TinyPebbles_70

TinyPebbles_71

TinyPebbles_72

TinyPebbles_73

TinyPebbles_74

TinyPebbles_75

TinyPebbles_76
(Cas4 exonuclease)

TinyPebbles_77

TinyPebbles_78
(immunity repressor)

TinyPebbles_79

TinyPebbles_80

TinyPebbles_81

TinyPebbles_82

TinyPebbles_83

TinyPebbles_84

TinyPebbles_85

TinyPebbles_86

TinyPebbles_87

TinyPebbles_88

TinyPebbles_89

TinyPebbles_90

TinyPebbles_91

TinyPebbles_92

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPX315711
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 198
Pitt Freezer Box Grid# F3
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload