Mycobacterium phage Flaverint
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Detailed Information for Phage Flaverint
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByDathan Stone
Year Found2015
Location FoundNew haven, CT USA
Finding InstitutionSouthern Connecticut State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature42°C
GPS Coordinates41.3352 N, 72.9414 W Map
Discovery NotesThis phage was found a a few meters away from a compost pile. Trees and vegetation covered the ground that was moist at the time.
Naming NotesFlavoring in Latin means "blowout". Throughout every purification round I would have plates that have been completely covered in plaques.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 3, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage12068
Genome length (bp)52593
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGTCGGTTA
GC Content63.7%
Sequencing Notesat position 5765 bp approximately 38% of reads have a T rather than consensus C
Fasta file available?Yes: Download fasta file
Characterization
ClusterA
SubclusterA11
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionTexas A & M University-Galveston
Annotation StatusIn GenBank
Plaque Notestemperate phage morphology. 3 mm is the average plaque size.
MorphotypeSiphoviridae
Number of Genes100
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW055904
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 8x10^10
Pitt Freezer Box# 23
Pitt Freezer Box Grid# H6
Available Files
GenBank File for PhameratorDownload