Detailed Information for Phage Clifton |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Izabella Domian and Sydney Shearouse |
Year Found | 2017 |
Location Found | Clifton, NJ USA |
Finding Institution | University of the Sciences (now St. Joseph's Univ) |
Program | Unavailable |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.8989 N, 73.8734 W Map |
Discovery Notes | Urban location. Dirt is surrounded by many fruits, vegetables, and trees. Rain and foot traffic is common. |
Naming Notes | The name is based on the location the phage sample was found |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 8, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 119 |
Genome length (bp) | 55727 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGAAGGCGC |
GC Content | 61.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of the Sciences (now St. Joseph's Univ) |
Annotation Status | In GenBank |
Plaque Notes | The plaque is small (about 1 mm), clear, and appears to be density dependent |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH371115 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
47 |
Pitt Freezer Box Grid# |
B12 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |