Mycobacterium phage Ochi17
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Detailed Information for Phage Ochi17
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Duplicates of this PhageKeyes
Found ByIkenna Okekeogbu
Year Found2017
Location FoundWest Lafayette, IN USA
Finding InstitutionPurdue University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.421389 N, 86.913889 W Map
Naming NotesFirst part of my middle name and year 2017 (17)
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 26, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage888
Genome length (bp)58069
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGATGGCGC
GC Content61.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sandalphon (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionPurdue University
Annotation StatusIn GenBank
Plaque NotesPlaque is circular and clear. Size is about 2-3 mm. margin is not visible
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Ochi17_1
(terminase small subunit)

Ochi17_2
(terminase large subunit)

Ochi17_3
(portal protein)

Ochi17_4
(capsid maturation protease)

Ochi17_5
(scaffolding protein)

Ochi17_6
(major capsid protein)

Ochi17_7
(head-to-tail adaptor)

Ochi17_8
(head-to-tail stopper)

Ochi17_9

Ochi17_10
(tail terminator)

Ochi17_11
(major tail protein)

Ochi17_12
(tail assembly chaperone)

Ochi17_13
(tail assembly chaperone)

Ochi17_14
(tape measure protein)

Ochi17_15
(minor tail protein)

Ochi17_16
(minor tail protein)

Ochi17_17
(minor tail protein)

Ochi17_18
(minor tail protein)

Ochi17_19
(D-ala-D-ala carboxypeptidase)

Ochi17_20
(minor tail protein)

Ochi17_21

Ochi17_22

Ochi17_23
(minor tail protein)

Ochi17_24

Ochi17_25

Ochi17_26

Ochi17_27

Ochi17_28
(lysin A)

Ochi17_29
(lysin B)

Ochi17_30
(holin)

Ochi17_31

Ochi17_32

Ochi17_33
(DNA polymerase III subunit)

Ochi17_34

Ochi17_35

Ochi17_36

Ochi17_37

Ochi17_38

Ochi17_39

Ochi17_40

Ochi17_41
(G-I-Y Y-I-G endonuclease)

Ochi17_42

Ochi17_43
(integrase)

Ochi17_44

Ochi17_45
(immunity repressor)

Ochi17_46
(Cro protein)

Ochi17_47

Ochi17_48
(antirepressor)

Ochi17_49

Ochi17_50

Ochi17_51

Ochi17_52

Ochi17_53

Ochi17_54

Ochi17_55

Ochi17_56

Ochi17_57

Ochi17_58

Ochi17_59

Ochi17_60
(WhiB family transcription factor)

Ochi17_61

Ochi17_62
(WhiB family transcription factor)

Ochi17_63
(MerR-like helix-turn-helix DNA binding domain protein)

Ochi17_64

Ochi17_65

Ochi17_66

Ochi17_67
(AAA-ATPase)

Ochi17_68
(DNA methylase)

Ochi17_69
(HNH endonuclease)

Ochi17_70

Ochi17_71

Ochi17_72

Ochi17_73
(DNA methylase)

Ochi17_74
(DNA methylase)

Ochi17_75

Ochi17_76

Ochi17_77

Ochi17_78

Ochi17_79

Ochi17_80

Ochi17_81

Ochi17_82

Ochi17_83
(MPME2 protein)

Ochi17_84

Ochi17_85

Ochi17_86

Ochi17_87

Ochi17_88

Ochi17_89

Ochi17_90

Ochi17_91

Ochi17_92

Ochi17_93

Ochi17_94

Ochi17_95

Ochi17_96

Ochi17_97

Ochi17_98

Ochi17_99
(G-I-Y Y-I-G endonuclease)

Ochi17_100

Ochi17_101

Ochi17_102

Ochi17_103

Ochi17_104

Ochi17_105

Ochi17_106

Ochi17_107
(glycosyltransferase)

Ochi17_108
(galactosyltransferase)

Ochi17_109
(glycosyltransferase)

Ochi17_110
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK359307
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2.5 * 10^10
Pitt Freezer Box# 60
Pitt Freezer Box Grid# B4
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload