Mycobacterium phage Lorde
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Detailed Information for Phage Lorde
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByGabrielle Giglietti
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.444517 N, 79.960856 W Map
Discovery NotesFound on SG4 lysogen
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 16, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage947
Genome length (bp)53852
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCCGATGGCAT
GC Content61.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Renaud18 (None)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sandalphon (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionUniversity of Pittsburgh
Annotation StatusQC Complete
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Lorde_1
(HNH endonuclease)

Lorde_2
(terminase, small subunit)

Lorde_3
(terminase, large subunit)

Lorde_4
(portal protein)

Lorde_5
(capsid maturation protease and MuF-like fusion protein)

Lorde_6
(scaffolding protein)

Lorde_7
(major capsid protein)

Lorde_8
(head-to-tail adaptor)

Lorde_9
(head-to-tail stopper)

Lorde_10

Lorde_11
(tail terminator)

Lorde_12
(major tail protein)

Lorde_13
(tail assembly chaperone)

Lorde_14
(tail assembly chaperone)

Lorde_15
(tape measure protein)

Lorde_16
(minor tail protein)

Lorde_17
(minor tail protein)

Lorde_18
(minor tail protein)

Lorde_19
(minor tail protein)

Lorde_20
(minor tail protein, D-ala-D-ala carboxypeptidase)

Lorde_21
(minor tail protein)

Lorde_22

Lorde_23

Lorde_24

Lorde_25

Lorde_26
(helix-turn-helix DNA binding domain)

Lorde_27

Lorde_28

Lorde_29

Lorde_30

Lorde_31
(lysin A)

Lorde_32

Lorde_33
(lysin B)

Lorde_34
(holin)

Lorde_35

Lorde_36

Lorde_37
(exonuclease)

Lorde_38

Lorde_39
(exonuclease)

Lorde_40

Lorde_41

Lorde_42
(tyrosine integrase)

Lorde_43
(toxin in toxin/antitoxin system, RelE-like)

Lorde_44
(antitoxin in toxin/antitoxin system, RelB-like)

Lorde_45

Lorde_46

Lorde_47
(immunity repressor)

Lorde_48
(CRO (control of repressor's operator))

Lorde_49

Lorde_50

Lorde_51
(excise)

Lorde_52

Lorde_53

Lorde_54

Lorde_55

Lorde_56

Lorde_57
(WhiB family transcription factor)

Lorde_58
(helix-turn-helix DNA binding domain)

Lorde_59
(WhiB family transcription factor)

Lorde_60
(helix-turn-helix DNA binding domain)

Lorde_61

Lorde_62

Lorde_63

Lorde_64

Lorde_65
(HNH endonuclease)

Lorde_66

Lorde_67

Lorde_68

Lorde_69

Lorde_70
(PAPS reductase-like domain protein)

Lorde_71

Lorde_72
(G-I-Y-Y-I-G endonuclease)

Lorde_73

Lorde_74

Lorde_75

Lorde_76

Lorde_77

Lorde_78

Lorde_79

Lorde_80

Lorde_81

Lorde_82

Lorde_83
(mycobacteriophage mobile element 1)

Lorde_84

Lorde_85

Lorde_86

Lorde_87

Lorde_88

Lorde_89

Lorde_90

Lorde_91

Lorde_92

Lorde_93

Lorde_94

Lorde_95

Lorde_96

Lorde_97
(helix-turn-helix DNA binding domain, MerR-like)

Lorde_98

Lorde_99

Lorde_100

Lorde_101

Lorde_102

Lorde_103
(glycosyltransferase)

Lorde_104

Lorde_105

Lorde_106
(glycosyltransferase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload