Mycobacterium phage Coco12
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Detailed Information for Phage Coco12
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJack Jones
Year Found2012
Location FoundSpokane, WA USA
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates47.666528 N, 117.403221 W Map
Discovery NotesFound in potted plant in the Gonzaga green house
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 28, 2019
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage9429
Genome length (bp)57693
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCCGATGGCAT
GC Content61.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Soul22 (None)

Akhila (F1)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sandalphon (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionGonzaga University
Annotation StatusQC Complete
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Coco12_1
(HNH endonuclease)

Coco12_2
(terminase, small subunit)

Coco12_3
(terminase, large subunit)

Coco12_4
(portal protein)

Coco12_5
(capsid maturation protease)

Coco12_6
(scaffolding protein)

Coco12_7
(major capsid protein)

Coco12_8
(head-to-tail adaptor)

Coco12_9
(head-to-tail stopper)

Coco12_10

Coco12_11
(tail terminator)

Coco12_12
(major tail protein)

Coco12_13
(tail assembly chaperone)

Coco12_14
(tail assembly chaperone)

Coco12_15
(HNH endonuclease)

Coco12_16
(tape measure protein)

Coco12_17
(minor tail protein)

Coco12_18
(minor tail protein)

Coco12_19
(minor tail protein)

Coco12_20
(minor tail protein)

Coco12_21
(minor tail protein, D-ala-D-ala carboxypeptidase)

Coco12_22

Coco12_23

Coco12_24
(helix-turn-helix DNA binding domain)

Coco12_25

Coco12_26

Coco12_27

Coco12_28

Coco12_29
(lysin A)

Coco12_30
(HNH endonuclease)

Coco12_31
(lysin B)

Coco12_32
(holin)

Coco12_33

Coco12_34

Coco12_35
(DnaQ-like (DNA polymerase III subunit))

Coco12_36

Coco12_37

Coco12_38
(helix-turn-helix DNA binding domain)

Coco12_39

Coco12_40
(tyrosine integrase)

Coco12_41

Coco12_42
(immunity repressor)

Coco12_43
(Cro (control of repressor's operator))

Coco12_44
(antirepressor)

Coco12_45
(helix-turn-helix DNA binding domain)

Coco12_46

Coco12_47

Coco12_48

Coco12_49
(excise)

Coco12_50

Coco12_51

Coco12_52

Coco12_53

Coco12_54

Coco12_55

Coco12_56
(WhiB family transcription factor)

Coco12_57
(helix-turn-helix DNA binding domain)

Coco12_58
(helix-turn-helix DNA binding domain)

Coco12_59
(WhiB family transcription factor)

Coco12_60

Coco12_61

Coco12_62

Coco12_63

Coco12_64
(RecA-like DNA Recombinase)

Coco12_65
(HNH endonuclease)

Coco12_66
(DNA helicase/DNA methylase)

Coco12_67

Coco12_68

Coco12_69

Coco12_70

Coco12_71

Coco12_72

Coco12_73

Coco12_74

Coco12_75

Coco12_76

Coco12_77

Coco12_78

Coco12_79

Coco12_80

Coco12_81
(mycobacteriophage mobile element 2 (MPME 2))

Coco12_82

Coco12_83

Coco12_84

Coco12_85

Coco12_86

Coco12_87

Coco12_88

Coco12_89

Coco12_90

Coco12_91

Coco12_92
(G-I-Y Y-I-G endonuclease)

Coco12_93

Coco12_94

Coco12_95

Coco12_96

Coco12_97

Coco12_98

Coco12_99

Coco12_100

Coco12_101

Coco12_102
(glycosyltransferase)

Coco12_103

Coco12_104
(glycosyltransferase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2.1x10^10
Available Files
EM PictureDownload
GenBank File for PhameratorDownload