Mycobacterium phage TDanisky
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Detailed Information for Phage TDanisky
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByUnavailable
Year Found2015
Location FoundVA USA
Finding InstitutionJames Madison University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates38.436274, -78.864428 Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 26, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2578
Genome length (bp)56275
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGAAGGCGC
GC Content61.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Renaud18 (None)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sandalphon (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionQueensborough Community College
Annotation StatusQC Complete
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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TDanisky_1
(Terminase small subunit)

TDanisky_2
(Terminase large subunit)

TDanisky_3
(Portal protein)

TDanisky_4
(Capsid maturation protease)

TDanisky_5
(Scaffolding protein)

TDanisky_6
(Major capsid protein)

TDanisky_7
(Head-to-tail adaptor)

TDanisky_8
(Head-to-tail stopper)

TDanisky_9

TDanisky_10
(Tail terminator)

TDanisky_11
(Major tail protein)

TDanisky_12
(Tail assembly chaperone)

TDanisky_13
(Tail assembly chaperone)

TDanisky_14
(Tape measure protein)

TDanisky_15
(Minor tail protein)

TDanisky_16
(Minor tail protein)

TDanisky_17

TDanisky_18
(Minor tail protein)

TDanisky_19
(Minor tail protein, D-ala-D-ala carboxypeptidase)

TDanisky_20
(Minor tail protein)

TDanisky_21

TDanisky_22

TDanisky_23

TDanisky_24

TDanisky_25

TDanisky_26

TDanisky_27

TDanisky_28

TDanisky_29

TDanisky_30
(Lysin A)

TDanisky_31
(Lysin B)

TDanisky_32

TDanisky_33
(membrane protein)

TDanisky_34

TDanisky_35
(DnaQ-like (DNA polymerase III subunit))

TDanisky_36

TDanisky_37
(membrane protein)

TDanisky_38

TDanisky_39

TDanisky_40

TDanisky_41

TDanisky_42

TDanisky_43

TDanisky_44

TDanisky_45
(tyrosine integrase)

TDanisky_46

TDanisky_47

TDanisky_48
(Immunity repressor)

TDanisky_49
(Cro (control of repressor s operator))

TDanisky_50
(Antirepressor)

TDanisky_51

TDanisky_52

TDanisky_53

TDanisky_54
(Excise)

TDanisky_55

TDanisky_56

TDanisky_57

TDanisky_58

TDanisky_59

TDanisky_60

TDanisky_61

TDanisky_62

TDanisky_63

TDanisky_64

TDanisky_65
(WhiB family transcription factor)

TDanisky_66
(helix-turn-helix DNA binding domain)

TDanisky_67
(Helix-turn-helix DNA binding domain)

TDanisky_68

TDanisky_69

TDanisky_70

TDanisky_71

TDanisky_72
(HNH endonuclease)

TDanisky_73

TDanisky_74

TDanisky_75

TDanisky_76

TDanisky_77

TDanisky_78
(helix-turn-helix dna binding domain)

TDanisky_79

TDanisky_80

TDanisky_81

TDanisky_82

TDanisky_83

TDanisky_84

TDanisky_85

TDanisky_86

TDanisky_87

TDanisky_88

TDanisky_89

TDanisky_90

TDanisky_91

TDanisky_92

TDanisky_93

TDanisky_94

TDanisky_95

TDanisky_96

TDanisky_97

TDanisky_98

TDanisky_99

TDanisky_100

TDanisky_101

TDanisky_102
(G-I-Y Y-I-G endonuclease)

TDanisky_103

TDanisky_104

TDanisky_105

TDanisky_106

TDanisky_107

TDanisky_108

TDanisky_109
(Glycosyltransferase)

TDanisky_110

TDanisky_111
(Glycosyltransferase)

TDanisky_112
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload