Mycobacterium phage Jarcob
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Detailed Information for Phage Jarcob
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByKiseki Carter
Year Found2021
Location FoundWILLIAMSBURG, VA United States
Finding InstitutionCollege of William & Mary
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates37.273596 N, 76.717818 W Map
Discovery NotesWas told by my instructor that my phage behaved perfectly. Final phage collected from my 10 ^-7 dilution. The picture included is from my initial plating.
Naming NotesIt is a modified version of my boyfriend's name
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 25, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1065
Genome length (bp)58937
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGAAGGCGC
GC Content61.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Soul22 (None)

Akhila (F1)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Aubs (F1)

Awesomesauce (F1)

Batiatus (F1)

Beakin (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Eradicator (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

GigiOuiOui (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

JalFarm20 (F1)

James (F1)

Jarcob (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

Leozinho (F1)

Leperchaun (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Madiba (F1)

MadMen (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Ms6 (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phalconet (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

Rita (F1)

RitaG (F1)

Rockne (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sabbb (F1)

Sandalphon (F1)

Sarma624 (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tootsieroll (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

VRedHorse (F1)

Wachhund (F1)

Wee (F1)

Whatsapiecost (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Yorick (F1)

Zerg (F1)

Zizzle (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionCollege of William & Mary
Annotation StatusQC Complete
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Jarcob_1
(terminase, small subunit)

Jarcob_2
(terminase, large subunit)

Jarcob_3
(portal protein)

Jarcob_4
(capsid maturation protease)

Jarcob_5
(scaffolding protein)

Jarcob_6
(major capsid protein)

Jarcob_7
(head-to-tail adaptor)

Jarcob_8
(head-to-tail stopper)

Jarcob_9

Jarcob_10
(tail terminator)

Jarcob_11
(major tail protein)

Jarcob_12
(tail assembly chaperone)

Jarcob_13
(tail assembly chaperone)

Jarcob_14
(tape measure protein)

Jarcob_15
(minor tail protein)

Jarcob_16
(minor tail protein)

Jarcob_17
(minor tail protein)

Jarcob_18
(minor tail protein)

Jarcob_19
(minor tail protein)

Jarcob_20
(minor tail protein)

Jarcob_21

Jarcob_22

Jarcob_23

Jarcob_24

Jarcob_25

Jarcob_26

Jarcob_27

Jarcob_28

Jarcob_29

Jarcob_30
(lysin A)

Jarcob_31
(lysin B)

Jarcob_32
(holin)

Jarcob_33

Jarcob_34

Jarcob_35
(DnaQ-like (DNA polymerase III subunit))

Jarcob_36

Jarcob_37

Jarcob_38

Jarcob_39

Jarcob_40

Jarcob_41

Jarcob_42
(transposase)

Jarcob_43

Jarcob_44
(tyrosine integrase)

Jarcob_45

Jarcob_46
(immunity repressor)

Jarcob_47
(Cro)

Jarcob_48

Jarcob_49

Jarcob_50
(Excise)

Jarcob_51

Jarcob_52

Jarcob_53

Jarcob_54

Jarcob_55

Jarcob_56

Jarcob_57
(WhiB family transcription factor)

Jarcob_58

Jarcob_59
(WhiB family transcription factor)

Jarcob_60
(helix-turn-helix DNA binding domain)

Jarcob_61

Jarcob_62

Jarcob_63

Jarcob_64
(RecA-like DNA recombinase)

Jarcob_65
(DNA helicase)

Jarcob_66
(DNA methyltransferase)

Jarcob_67

Jarcob_68

Jarcob_69
(DNA methyltransferase)

Jarcob_70
(DNA methyltransferase)

Jarcob_71

Jarcob_72

Jarcob_73
(G-I-Y Y-I-G endonuclease)

Jarcob_74

Jarcob_75

Jarcob_76

Jarcob_77

Jarcob_78

Jarcob_79

Jarcob_80

Jarcob_81

Jarcob_82

Jarcob_83
(mycobacteriophage mobile element 1 (MPME 1))

Jarcob_84

Jarcob_85

Jarcob_86

Jarcob_87

Jarcob_88

Jarcob_89

Jarcob_90

Jarcob_91

Jarcob_92

Jarcob_93

Jarcob_94
(G-I-Y Y-I-G endonuclease)

Jarcob_95

Jarcob_96

Jarcob_97

Jarcob_98

Jarcob_99

Jarcob_100

Jarcob_101

Jarcob_102

Jarcob_103

Jarcob_104
(glycosyltransferase)

Jarcob_105

Jarcob_106
(glycosyltransferase)

Jarcob_107
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload