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Mycobacterium phage Latretium
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Detailed Information for Phage Latretium
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByLarry Ashby
Year Found2017
Location FoundAtlanta, GA USA
Finding InstitutionMorehouse College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates33.74585 N, 84.412009 W Map
Discovery NotesIts possible that it is a "A" Cluster but until further investigation of the type of cluster the phage is, it is unknown. I found the phages location infront of Spelman colleges Camille Oliva Garden. It is unknown whether the gardens soil was enriched or not but it is know that the soil looked rich in color with being a dark brown to blackish color.
Naming Notes"Latretium" or L"atre" for short is derived from my name larry hence "La' and my nickname is Tre so therefore the name of my phage is "Latretium".
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 9, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3107
Genome length (bp)59282
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGTAGGCGC
GC Content61.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

Click to View

Soul22 (None)

Akhila (F1)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Eradicator (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

GigiOuiOui (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

JalFarm20 (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

Leozinho (F1)

Leperchaun (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Madiba (F1)

MadMen (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

Rita (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sabbb (F1)

Sandalphon (F1)

Sarma624 (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tootsieroll (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

VRedHorse (F1)

Wachhund (F1)

Wee (F1)

Whatsapiecost (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Zizzle (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionUniversity of Alabama at Birmingham
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Latretium_1
(terminase small subunit)

Latretium_2
(terminase large subunit)

Latretium_3
(portal protein)

Latretium_4
(capsid maturation protease)

Latretium_5
(scaffolding protein)

Latretium_6
(major capsid protein)

Latretium_7
(head-to-tail adaptor)

Latretium_8
(head-to-tail stopper)

Latretium_9

Latretium_10
(tail terminator)

Latretium_11
(major tail protein)

Latretium_12
(tail assembly chaperone)

Latretium_13
(tail assembly chaperone)

Latretium_14

Latretium_15
(tape measure protein)

Latretium_16
(minor tail protein)

Latretium_17
(minor tail protein)

Latretium_18
(minor tail protein)

Latretium_19
(minor tail protein)

Latretium_20
(minor tail protein)

Latretium_21

Latretium_22

Latretium_23

Latretium_24

Latretium_25

Latretium_26
(DNA binding protein)

Latretium_27

Latretium_28

Latretium_29

Latretium_30

Latretium_31
(lysin A)

Latretium_32
(lysin B)

Latretium_33
(holin)

Latretium_34

Latretium_35

Latretium_36
(DnaQ-like DNA polymerase III subunit)

Latretium_37

Latretium_38

Latretium_39

Latretium_40

Latretium_41

Latretium_42

Latretium_43

Latretium_44

Latretium_45
(tyrosine integrase)

Latretium_46

Latretium_47

Latretium_48
(immunity repressor)

Latretium_49
(Cro protein)

Latretium_50
(antirepressor)

Latretium_51

Latretium_52

Latretium_53
(excise)

Latretium_54

Latretium_55

Latretium_56

Latretium_57

Latretium_58

Latretium_59
(WhiB family transcription factor)

Latretium_60

Latretium_61
(WhiB family transcription factor)

Latretium_62
(helix-turn-helix DNA binding domain protein)

Latretium_63

Latretium_64

Latretium_65

Latretium_66
(AAA-ATPase)

Latretium_67

Latretium_68

Latretium_69

Latretium_70
(G-I-Y Y-I-G endonuclease)

Latretium_71

Latretium_72

Latretium_73

Latretium_74

Latretium_75

Latretium_76

Latretium_77

Latretium_78

Latretium_79

Latretium_80

Latretium_81

Latretium_82

Latretium_83

Latretium_84

Latretium_85
(MPME1 protein)

Latretium_86

Latretium_87

Latretium_88

Latretium_89

Latretium_90

Latretium_91

Latretium_92

Latretium_93

Latretium_94
(G-I-Y Y-I-G endonuclease)

Latretium_95

Latretium_96

Latretium_97

Latretium_98

Latretium_99

Latretium_100

Latretium_101

Latretium_102

Latretium_103

Latretium_104
(glycosyltransferase)

Latretium_105

Latretium_106
(glycosyltransferase)

Latretium_107

Submitted Minimal DNA Master FileDownload
Author ListDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ209299
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 47
Pitt Freezer Box Grid# F9
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload