Detailed Information for Phage Fastidio |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Hyunbi H, Ethan W, Payson D, Matt J |
Year Found | 2023 |
Location Found | Provo, UT United States |
Finding Institution | Brigham Young University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 29°C |
GPS Coordinates | 40.214582 N, 111.618295 W Map |
Discovery Notes | Collected from soil in Utah County. |
Naming Notes | I had to do a process called 10 plate a couple times in order to create a sufficiently large high-titer lysate. This annoyed me a little bit because I didn't understand why it wasn't working. Therefore I named it "fastidio" which is annoyance in spanish. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Apr 24, 2024 |
Sequencing Facility | CD Genomics |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 3593 |
Genome length (bp) | 55839 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGACGGCGC |
GC Content | 61.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Brigham Young University |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 105 |
Number of tRNAs | 1 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ244011 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |