Detailed Information for Phage OldBen |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Luke Keller |
Year Found | 2016 |
Location Found | Bismarck, ND USA |
Finding Institution | University of Mary |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 46.4338 N, 100.4507 W Map |
Discovery Notes | The Soil sample was collected on 9-26-16 the ambient temperature was 61 degrees fahrenheit.The sample was found under some mulch near new athletic complex. |
Naming Notes | I was unable to find any phage throughout this course. Finally, I labeled one plate as "the final hope". Obiwan Kenobe was the final hope of the republic just as old ben was the final hope for the class. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1805 |
Genome length (bp) | 57159 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGACGGCGC |
GC Content | 61.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MG770213 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
40 |
Pitt Freezer Box Grid# |
A8 |
Available Files |
GenBank File for Phamerator | Download |