Detailed Information for Phage Tweety |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | T. Pham |
Year Found | 2004 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 40.44422 N, 79.953218 W Map |
Naming Notes | This student named her phage after herself, using her nickname. But notice her name is Thuy T. Pham and she has a great paper published about her phage, Tweety! |
Mutants |
Mutants of this Phage |
Click to View
DEM200
DEM201
DEM202
DEM205
DEM301
|
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Apr 3, 2007 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Sanger |
Genome length (bp) | 58692 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
GC Content | 61.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 109 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | EF536069 |
Refseq Number | NC_009820 |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
3 |
Pitt Freezer Box Grid# |
C2 |
Available Files |
Plaque Picture | Download |
Virtual Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |