Mycobacterium phage Rockne
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Detailed Information for Phage Rockne
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByThomas Bogen
Year Found2012
Location FoundSouth Euclid, OH USA
Finding InstitutionSt. Ignatius High School
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.518166 N, 81.527814 W Map
Discovery NotesSurface soil from garden. One of four picks from original enriched plate.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 29, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1060
Genome length (bp)56704
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGAAGGCGC
GC Content61.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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MulchSalad (None)

Soul22 (None)

Akhila (F1)

Alexphander (F1)

AlpineSix (F1)

ArcusAngelus (F1)

Ardmore (F1)

Aubs (F1)

Awesomesauce (F1)

Batiatus (F1)

Beakin (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BlueCrab (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

ChickenDinner (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

DaddyRickover (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Eradicator (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

GigiOuiOui (F1)

Girafales (F1)

Girr (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

JalFarm20 (F1)

James (F1)

Jarcob (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Karhdo (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

Leozinho (F1)

Leperchaun (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

LunaBlu (F1)

Madiba (F1)

MadMen (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Maravista (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Ms6 (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

Oksu (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phalconet (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Radiance (F1)

Ramsey (F1)

RedBird (F1)

Rialto (F1)

Rita (F1)

RitaG (F1)

Rockne (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sabbb (F1)

Sandalphon (F1)

Sarma624 (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

ShroomBoi (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Stap (F1)

Starcevich (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tootsieroll (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

VRedHorse (F1)

Wachhund (F1)

Wee (F1)

Whatsapiecost (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Yorick (F1)

Zerg (F1)

Zizzle (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionUniversity of Lagos
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Rockne_1
(terminase small subunit)

Rockne_2
(terminase large subunit)

Rockne_3
(portal protein)

Rockne_4
(capsid maturation protease)

Rockne_5
(scaffolding protein)

Rockne_6
(major capsid protein)

Rockne_7
(head-to-tail adaptor)

Rockne_8
(head-to-tail stopper)

Rockne_9

Rockne_10
(tail terminator)

Rockne_11
(major tail protein)

Rockne_12
(tail assembly chaperone)

Rockne_13
(tail assembly chaperone)

Rockne_14
(tape measure protein)

Rockne_15
(minor tail protein)

Rockne_16
(minor tail protein)

Rockne_17
(minor tail protein)

Rockne_18
(minor tail protein)

Rockne_19
(minor tail protein)

Rockne_20
(minor tail protein)

Rockne_21

Rockne_22

Rockne_23

Rockne_24

Rockne_25

Rockne_26

Rockne_27

Rockne_28

Rockne_29

Rockne_30
(lysin A, N-acetylmuramoyl-L-alanine)

Rockne_31
(lysin B)

Rockne_32
(holin)

Rockne_33

Rockne_34

Rockne_35
(DnaQ-like DNA polymerase III subunit)

Rockne_36

Rockne_37

Rockne_38

Rockne_39

Rockne_40
(tyrosine integrase)

Rockne_41

Rockne_42

Rockne_43
(immunity repressor)

Rockne_44
(helix-turn-helix binding domain protein)

Rockne_45
(antirepressor)

Rockne_46

Rockne_47

Rockne_48
(excise)

Rockne_49

Rockne_50

Rockne_51

Rockne_52

Rockne_53

Rockne_54

Rockne_55

Rockne_56

Rockne_57

Rockne_58
(WhiB family transcription factor)

Rockne_59
(helix-turn-helix DNA binding protein)

Rockne_60
(WhiB family transcription factor)

Rockne_61
(helix-turn-helix DNA binding domain protein)

Rockne_62

Rockne_63

Rockne_64

Rockne_65
(ssDNA binding protein)

Rockne_66
(HNH endonuclease)

Rockne_67

Rockne_68
(DNA methyltransferase)

Rockne_69

Rockne_70

Rockne_71

Rockne_72
(RepA-like replication initiator)

Rockne_73
(helicase loader)

Rockne_74

Rockne_75

Rockne_76

Rockne_77

Rockne_78

Rockne_79

Rockne_80

Rockne_81

Rockne_82

Rockne_83

Rockne_84
(MPME1 protein)

Rockne_85

Rockne_86

Rockne_87

Rockne_88

Rockne_89

Rockne_90

Rockne_91

Rockne_92

Rockne_93

Rockne_94

Rockne_95

Rockne_96

Rockne_97
(helix-turn-helix DNA binding domain protein)

Rockne_98

Rockne_99

Rockne_100

Rockne_101

Rockne_102

Rockne_103

Rockne_104
(glycosyltransferase)

Rockne_105

Rockne_106
(serine/threonine kinase)

Rockne_107
(glycosyltransferase)

Rockne_108
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON970595
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 116
Pitt Freezer Box Grid# H7
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload