Mycobacterium phage Mandlovu
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Detailed Information for Phage Mandlovu
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByNothando Mchunu
Year Found2018
Location FoundDurban, South Africa
Finding InstitutionUniversity of Kwazulu-Natal
ProgramMycobacterial Genetics Course, Durban, South Africa
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates29.816532 S, 30.943218 E Map
Discovery NotesIsolated from the soil found on the westville campus, bus stop area, next to the trees. Soil was very dry because area was exposed to a lot of sunlight.
Naming NotesName was taken from grandmothers clan name. Her surname is Ndlovu but we all call her by one of her clan names which is Mandlovu.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 26, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1476
Genome length (bp)55413
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGACGGCGC
GC Content61.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Soul22 (None)

Akhila (F1)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Eradicator (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sandalphon (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionUniversity of Kwazulu-Natal
Annotation StatusIn GenBank
Plaque NotesThey were clear and white. therefore temperate.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Mandlovu_1
(terminase small subunit)

Mandlovu_2
(terminase large subunit)

Mandlovu_3
(portal protein)

Mandlovu_4
(capsid maturation protease)

Mandlovu_5
(scaffolding protein)

Mandlovu_6
(major capsid protein)

Mandlovu_7
(head-to-tail adaptor)

Mandlovu_8
(head-to-tail stopper)

Mandlovu_9

Mandlovu_10
(tail terminator)

Mandlovu_11
(major tail protein)

Mandlovu_12
(tail assembly chaperone)

Mandlovu_13
(tail assembly chaperone)

Mandlovu_14
(tape measure protein)

Mandlovu_15
(minor tail protein)

Mandlovu_16
(minor tail protein)

Mandlovu_17
(minor tail protein)

Mandlovu_18
(minor tail protein)

Mandlovu_19
(minor tail protein)

Mandlovu_20
(minor tail protein)

Mandlovu_21

Mandlovu_22

Mandlovu_23

Mandlovu_24

Mandlovu_25
(helix-turn-helix DNA binding domain protein)

Mandlovu_26

Mandlovu_27

Mandlovu_28

Mandlovu_29

Mandlovu_30
(lysin A)

Mandlovu_31
(HNH endonuclease)

Mandlovu_32
(lysin B)

Mandlovu_33

Mandlovu_34

Mandlovu_35

Mandlovu_36
(DNA polymerase III subunit)

Mandlovu_37

Mandlovu_38

Mandlovu_39

Mandlovu_40
(tyrosine integrase)

Mandlovu_41

Mandlovu_42

Mandlovu_43
(immunity repressor)

Mandlovu_44
(Cro protein)

Mandlovu_45

Mandlovu_46

Mandlovu_47
(excise)

Mandlovu_48

Mandlovu_49

Mandlovu_50

Mandlovu_51

Mandlovu_52

Mandlovu_53
(WhiB family transcription factor)

Mandlovu_54

Mandlovu_55
(WhiB family transcription factor)

Mandlovu_56
(helix-turn-helix DNA binding domain protein)

Mandlovu_57

Mandlovu_58

Mandlovu_59

Mandlovu_60

Mandlovu_61
(HNH endonuclease)

Mandlovu_62

Mandlovu_63

Mandlovu_64

Mandlovu_65

Mandlovu_66

Mandlovu_67
(DNA helicase)

Mandlovu_68

Mandlovu_69

Mandlovu_70

Mandlovu_71

Mandlovu_72

Mandlovu_73

Mandlovu_74

Mandlovu_75

Mandlovu_76

Mandlovu_77

Mandlovu_78

Mandlovu_79

Mandlovu_80

Mandlovu_81

Mandlovu_82

Mandlovu_83

Mandlovu_84

Mandlovu_85

Mandlovu_86

Mandlovu_87

Mandlovu_88

Mandlovu_89

Mandlovu_90

Mandlovu_91
(G-I-Y-Y-I-G endonuclease)

Mandlovu_92

Mandlovu_93

Mandlovu_94

Mandlovu_95

Mandlovu_96

Mandlovu_97

Mandlovu_98

Mandlovu_99
(glycosyltransferase)

Mandlovu_100

Mandlovu_101
(glycosyltransferase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT684597
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload