Mycobacterium phage Plumbus
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Detailed Information for Phage Plumbus
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByColeman Kaestner,Takola Kristensen
Year Found2016
Location FoundOlympia, WA USA
Finding InstitutionThe Evergreen State College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates47.07218 N, 122.978975 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 12, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage5577
Genome length (bp)54468
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCCGACGGCAT
GC Content61.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Soul22 (None)

Akhila (F1)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Eradicator (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sandalphon (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionRockland Community College
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Plumbus_1
(HNH endonuclease)

Plumbus_2

Plumbus_3
(terminase)

Plumbus_4
(portal protein)

Plumbus_5
(MuF-like minor capsid protein)

Plumbus_6
(scaffolding protein)

Plumbus_7
(major capsid protein)

Plumbus_8
(head-to-tail adaptor)

Plumbus_9
(head-to-tail stopper)

Plumbus_10

Plumbus_11
(tail terminator)

Plumbus_12
(major tail protein)

Plumbus_13
(tail assembly chaperone)

Plumbus_14
(tail assembly chaperone)

Plumbus_15
(tape measure protein)

Plumbus_16
(minor tail protein)

Plumbus_17
(minor tail protein)

Plumbus_18
(minor tail protein)

Plumbus_19
(minor tail protein)

Plumbus_20
(minor tail protein)

Plumbus_21

Plumbus_22

Plumbus_23

Plumbus_24

Plumbus_25

Plumbus_26
(helix-turn-helix DNA binding domain)

Plumbus_27

Plumbus_28

Plumbus_29

Plumbus_30

Plumbus_31

Plumbus_32
(lysin A)

Plumbus_33
(lysin B)

Plumbus_34

Plumbus_35

Plumbus_36

Plumbus_37
(exonuclease)

Plumbus_38

Plumbus_39

Plumbus_40

Plumbus_41

Plumbus_42

Plumbus_43
(tyrosine integrase)

Plumbus_44

Plumbus_45
(immunity repressor)

Plumbus_46
(excise)

Plumbus_47
(antirepressor)

Plumbus_48
(DNA binding protein)

Plumbus_49

Plumbus_50

Plumbus_51

Plumbus_52
(helix-turn-helix DNA binding protein)

Plumbus_53

Plumbus_54

Plumbus_55

Plumbus_56

Plumbus_57

Plumbus_58

Plumbus_59
(WhiB family transcription factor)

Plumbus_60
(DNA binding protein)

Plumbus_61
(WhiB family transcription factor)

Plumbus_62
(DNA binding protein)

Plumbus_63

Plumbus_64

Plumbus_65

Plumbus_66
(HNH endonuclease)

Plumbus_67

Plumbus_68
(HNH endonuclease)

Plumbus_69

Plumbus_70

Plumbus_71

Plumbus_72

Plumbus_73

Plumbus_74

Plumbus_75

Plumbus_76

Plumbus_77
(Hypothetical P:rotein)

Plumbus_78

Plumbus_79

Plumbus_80

Plumbus_81

Plumbus_82

Plumbus_83

Plumbus_84

Plumbus_85

Plumbus_86

Plumbus_87

Plumbus_88

Plumbus_89

Plumbus_90

Plumbus_91

Plumbus_92

Plumbus_93
(helix-turn-helix DNA binding domain)

Plumbus_94
(G-I-Y Y-I-G endonuclease)

Plumbus_95

Plumbus_96

Plumbus_97

Plumbus_98

Plumbus_99

Plumbus_100
(glycosyltransferase)

Plumbus_101

Plumbus_102
(glycosyltransferase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW055915
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
EM PictureDownload
GenBank File for PhameratorDownload