Detailed Information for Phage SiSi |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Mariah Minder |
Year Found | 2011 |
Location Found | Spokane, WA USA |
Finding Institution | Gonzaga University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 47.667056 N, 117.402794 W Map |
Discovery Notes | Found in soil in flower bed, slightly moist, outside temperature 67° F, 1 inch deep. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 23, 2012 |
Genome length (bp) | 56279 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGAAGGCGC |
GC Content | 61.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Plaques are clear with, turbid halos. All plaques are similar in size, plaque size however very greatly depending on incubation time. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KC661278 |
Refseq Number | NC_021301 |
Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
Archiving Info |
Archiving status |
Archived |
SEA Designator |
2011GONZsisiMAM |
Pitt Freezer Box# |
24 |
Pitt Freezer Box Grid# |
55 |
Available Files |
Plaque Picture | Download |