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Mycobacterium phage Sarma624
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Detailed Information for Phage Sarma624
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByDeepika Sarma
Year Found2012
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.444138 N, 79.952145 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 4, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1355
Genome length (bp)54312
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCCGATGGCAT
GC Content61.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

Click to View

Soul22 (None)

Akhila (F1)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Eradicator (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

GigiOuiOui (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

JalFarm20 (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

Leozinho (F1)

Leperchaun (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Madiba (F1)

MadMen (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

Rita (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sabbb (F1)

Sandalphon (F1)

Sarma624 (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tootsieroll (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

VRedHorse (F1)

Wachhund (F1)

Wee (F1)

Whatsapiecost (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Zizzle (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionSUNY Old Westbury
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Sarma624_1
(HNH endonuclease)

Sarma624_2
(terminase small subunit)

Sarma624_3
(terminase large subunit)

Sarma624_4
(portal protein)

Sarma624_5
(capsid maturation protease)

Sarma624_6
(scaffolding protein)

Sarma624_7
(major capsid protein)

Sarma624_8
(head-to-tail adaptor)

Sarma624_9
(head-to-tail stopper)

Sarma624_10

Sarma624_11
(tail terminator)

Sarma624_12
(major tail protein)

Sarma624_13
(tail assembly chaperone)

Sarma624_14
(tail assembly chaperone)

Sarma624_15
(tape measure protein)

Sarma624_16
(minor tail protein)

Sarma624_17
(minor tail protein)

Sarma624_18
(minor tail protein)

Sarma624_19
(minor tail protein)

Sarma624_20
(minor tail protein)

Sarma624_21

Sarma624_22

Sarma624_23

Sarma624_24

Sarma624_25

Sarma624_26
(lysin A)

Sarma624_27
(lysin B)

Sarma624_28
(holin)

Sarma624_29

Sarma624_30

Sarma624_31
(DnaQ-like DNA polymerase III subunit)

Sarma624_32

Sarma624_33

Sarma624_34

Sarma624_35

Sarma624_36

Sarma624_37

Sarma624_38
(tyrosine integrase)

Sarma624_39

Sarma624_40

Sarma624_41
(immunity repressor)

Sarma624_42
(Cro protein)

Sarma624_43
(antirepressor)

Sarma624_44

Sarma624_45

Sarma624_46

Sarma624_47

Sarma624_48
(excise)

Sarma624_49

Sarma624_50

Sarma624_51

Sarma624_52

Sarma624_53

Sarma624_54

Sarma624_55
(WhiB family transcription factor)

Sarma624_56
(helix-turn-helix DNA binding domain protein)

Sarma624_57
(helix-turn-helix DNA binding domain protein)

Sarma624_58
(WhiB family transcription factor)

Sarma624_59

Sarma624_60

Sarma624_61

Sarma624_62

Sarma624_63
(AAA-ATPase)

Sarma624_64
(HNH endonuclease)

Sarma624_65
(DNA helicase/methyltransferase fusion protein)

Sarma624_66

Sarma624_67

Sarma624_68

Sarma624_69

Sarma624_70

Sarma624_71

Sarma624_72

Sarma624_73

Sarma624_74

Sarma624_75

Sarma624_76

Sarma624_77

Sarma624_78

Sarma624_79

Sarma624_80

Sarma624_81

Sarma624_82

Sarma624_83

Sarma624_84

Sarma624_85

Sarma624_86

Sarma624_87

Sarma624_88

Sarma624_89
(ATP binding cassette-like protein)

Sarma624_90

Sarma624_91

Sarma624_92

Sarma624_93

Sarma624_94
(G-I-Y Y-I-G endonuclease)

Sarma624_95

Sarma624_96

Sarma624_97

Sarma624_98

Sarma624_99

Sarma624_100

Sarma624_101

Sarma624_102

Sarma624_103
(glycosyltransferase)

Sarma624_104

Sarma624_105
(glycosyltransferase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ622174
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 8
Pitt Freezer Box Grid# A7
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload