Mycobacterium phage JalFarm20
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage JalFarm20
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJalynn Farmer
Year Found2020
Location FoundPablo, MT USA
Finding InstitutionSalish Kootenai College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates47.592595 N, 114.109681 W Map
Discovery NotesFound in compost pile on SKC campus
Naming NotesFirst three letters of first name and first four letters of last name and year 2020 found.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 5, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage594
Genome length (bp)58768
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCCGATGGCAT
GC Content61.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

Click to View

Soul22 (None)

Akhila (F1)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Eradicator (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

GigiOuiOui (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

JalFarm20 (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

Leozinho (F1)

Leperchaun (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Madiba (F1)

MadMen (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

Rita (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sabbb (F1)

Sandalphon (F1)

Sarma624 (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tootsieroll (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

VRedHorse (F1)

Wachhund (F1)

Wee (F1)

Whatsapiecost (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Zizzle (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionSalish Kootenai College
Annotation StatusIn GenBank
Plaque Notesmedium, lysogenic
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

JalFarm20_1
(HNH endonuclease)

JalFarm20_2

JalFarm20_3
(terminase)

JalFarm20_4
(portal protein)

JalFarm20_5
(capsid maturation protease)

JalFarm20_6
(scaffolding protein)

JalFarm20_7
(major capsid protein)

JalFarm20_8
(head-to-tail adaptor)

JalFarm20_9
(head-to-tail stopper)

JalFarm20_10

JalFarm20_11
(tail terminator)

JalFarm20_12
(major tail protein)

JalFarm20_13
(tail assembly chaperone)

JalFarm20_14
(tail assembly chaperone)

JalFarm20_15
(HNH endonuclease)

JalFarm20_16
(tape measure protein)

JalFarm20_17
(minor tail protein)

JalFarm20_18
(minor tail protein)

JalFarm20_19
(minor tail protein)

JalFarm20_20
(minor tail protein)

JalFarm20_21
(minor tail protein)

JalFarm20_22
(minor tail protein)

JalFarm20_23

JalFarm20_24

JalFarm20_25

JalFarm20_26

JalFarm20_27
(helix-turn-helix DNA binding domain)

JalFarm20_28

JalFarm20_29

JalFarm20_30

JalFarm20_31

JalFarm20_32
(lysin A)

JalFarm20_33
(HNH endonuclease)

JalFarm20_34
(lysin B)

JalFarm20_35
(holin)

JalFarm20_36

JalFarm20_37

JalFarm20_38
(DnaQ-like (DNA polymerase III subunit))

JalFarm20_39

JalFarm20_40

JalFarm20_41

JalFarm20_42

JalFarm20_43

JalFarm20_44

JalFarm20_45

JalFarm20_46

JalFarm20_47

JalFarm20_48

JalFarm20_49
(helix-turn-helix DNA binding domain)

JalFarm20_50

JalFarm20_51

JalFarm20_52
(tyrosine integrase)

JalFarm20_53

JalFarm20_54

JalFarm20_55
(Cro (control of repressor))

JalFarm20_56
(antirepressor)

JalFarm20_57

JalFarm20_58

JalFarm20_59
(excise)

JalFarm20_60

JalFarm20_61

JalFarm20_62

JalFarm20_63

JalFarm20_64

JalFarm20_65

JalFarm20_66

JalFarm20_67

JalFarm20_68

JalFarm20_69

JalFarm20_70
(WhiB family transcription factor)

JalFarm20_71
(helix-turn-helix DNA binding domain)

JalFarm20_72
(helix-turn-helix DNA binding domain)

JalFarm20_73
(WhiB family transcription factor)

JalFarm20_74

JalFarm20_75

JalFarm20_76

JalFarm20_77

JalFarm20_78
(HNH endonuclease)

JalFarm20_79
(DNA methylase)

JalFarm20_80

JalFarm20_81

JalFarm20_82

JalFarm20_83

JalFarm20_84

JalFarm20_85

JalFarm20_86

JalFarm20_87

JalFarm20_88
(DNA methylase)

JalFarm20_89

JalFarm20_90

JalFarm20_91

JalFarm20_92

JalFarm20_93

JalFarm20_94

JalFarm20_95

JalFarm20_96

JalFarm20_97

JalFarm20_98

JalFarm20_99

JalFarm20_100

JalFarm20_101

JalFarm20_102

JalFarm20_103
(helix-turn-helix DNA binding domain)

JalFarm20_104

JalFarm20_105

JalFarm20_106

JalFarm20_107

JalFarm20_108

JalFarm20_109

JalFarm20_110
(glycosyltransferase)

JalFarm20_111

JalFarm20_112
(glycosyltransferase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ958744
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 129
Pitt Freezer Box Grid# A4
Available Files
GenBank File for PhameratorDownload