Detailed Information for Phage JalFarm20 |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Jalynn Farmer |
Year Found | 2020 |
Location Found | Pablo, MT USA |
Finding Institution | Salish Kootenai College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 47.592595 N, 114.109681 W Map |
Discovery Notes | Found in compost pile on SKC campus |
Naming Notes | First three letters of first name and first four letters of last name and year 2020 found. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 5, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 594 |
Genome length (bp) | 58768 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CCGATGGCAT |
GC Content | 61.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Salish Kootenai College |
Annotation Status | In GenBank |
Plaque Notes | medium, lysogenic |
Morphotype | Siphoviridae |
Number of Genes | 112 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ958744 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
129 |
Pitt Freezer Box Grid# |
A4 |
Available Files |
GenBank File for Phamerator | Download |