Mycobacterium phage Cornucopia
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Detailed Information for Phage Cornucopia
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesLeia
Found ByOlivia Bryan, Lindsay Budak, Michael Moreno
Year Found2016
Location FoundMelrose, MA USA
Finding InstitutionMerrimack College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.451333 N, 71.076333 W Map
Discovery NotesDiscovered in the soil collected from an active vermiculture compost bin (a few inches under the surface).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 17, 2017
Genome length (bp)55422
Character of genome endsUnknown
Overhang Length10 bases
Overhang SequenceCCGAAGGCAT
GC Content61.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sandalphon (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionMerrimack College
Annotation StatusIn GenBank
Plaque NotesLarge plaques with a clear center and opaque "halo" around the edge.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Cornucopia_1
(HNH endonuclease)

Cornucopia_2
(terminase small subunit)

Cornucopia_3
(terminase large subunit)

Cornucopia_4
(portal protein)

Cornucopia_5

Cornucopia_6
(scaffolding protein)

Cornucopia_7
(major capsid protein)

Cornucopia_8
(head-to-tail adaptor)

Cornucopia_9
(head-to-tail stopper)

Cornucopia_10

Cornucopia_11
(tail terminator)

Cornucopia_12
(major tail protein)

Cornucopia_13
(tail assembly chaperone)

Cornucopia_14
(tail assembly chaperone)

Cornucopia_15
(tapemeasure protein)

Cornucopia_16
(minor tail protein)

Cornucopia_17
(minor tail protein)

Cornucopia_18
(minor tail protein)

Cornucopia_19
(minor tail protein)

Cornucopia_20
(minor tail protein)

Cornucopia_21
(minor tail protein)

Cornucopia_22

Cornucopia_23

Cornucopia_24

Cornucopia_25

Cornucopia_26
(helix-turn-helix DNA-binding domain protein)

Cornucopia_27

Cornucopia_28

Cornucopia_29

Cornucopia_30

Cornucopia_31
(lysin A)

Cornucopia_32
(lysin B)

Cornucopia_33

Cornucopia_34

Cornucopia_35

Cornucopia_36
(DnaQ-like exonuclease)

Cornucopia_37

Cornucopia_38

Cornucopia_39

Cornucopia_40

Cornucopia_41

Cornucopia_42

Cornucopia_43

Cornucopia_44
(HNH endonuclease)

Cornucopia_45
(integrase)

Cornucopia_46
(RelE-like toxin)

Cornucopia_47
(RelB-like antitoxin)

Cornucopia_48

Cornucopia_49
(immunity repressor)

Cornucopia_50
(Cro protein)

Cornucopia_51
(antirepressor)

Cornucopia_52

Cornucopia_53
(excise)

Cornucopia_54

Cornucopia_55

Cornucopia_56

Cornucopia_57

Cornucopia_58

Cornucopia_59
(WhiB family transcription factor)

Cornucopia_60

Cornucopia_61
(WhiB family transcription factor)

Cornucopia_62
(helix-turn-helix DNA-binding domain protein)

Cornucopia_63

Cornucopia_64

Cornucopia_65

Cornucopia_66

Cornucopia_67
(HNH endonuclease)

Cornucopia_68

Cornucopia_69

Cornucopia_70
(DNA methylase)

Cornucopia_71

Cornucopia_72

Cornucopia_73

Cornucopia_74

Cornucopia_75

Cornucopia_76

Cornucopia_77

Cornucopia_78

Cornucopia_79

Cornucopia_80

Cornucopia_81

Cornucopia_82

Cornucopia_83
(MPME 1 protein)

Cornucopia_84

Cornucopia_85

Cornucopia_86

Cornucopia_87

Cornucopia_88

Cornucopia_89

Cornucopia_90
(membrane protein)

Cornucopia_91

Cornucopia_92

Cornucopia_93

Cornucopia_94
(MerR-like helix-turn-helix DNA binding domain)

Cornucopia_95

Cornucopia_96

Cornucopia_97

Cornucopia_98

Cornucopia_99

Cornucopia_100

Cornucopia_101
(glycosyltransferase)

Cornucopia_102
(serine/threonine kinase)

Cornucopia_103

Cornucopia_104

Cornucopia_105
(glycosyltransferase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK494118
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 73
Pitt Freezer Box Grid# G12
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload