| Detailed Information for Phage Ovechkin |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Sarah Brusko |
| Year Found | 2010 |
| Location Found | Richmond, VA USA |
| Finding Institution | Virginia Commonwealth University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 37.552266 N, 77.454375 W Map |
| Discovery Notes | a fairly dry sample of soil, roots, and mulch taken from a small shrub garden located outside of a church, 4-6 inches below the surface, at approximately 75°F in early September 2010 |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jun 25, 2012 |
| Genome length (bp) | 58338 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGAAGGCGC |
| GC Content | 62.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | F |
| Subcluster | F1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques as small as 0.2 mm and as large as 4.0 mm. Some are pinpoints (about 0.6 mm in diameter). Others may be broad, comet/fan tails either beside or overlapping a central, pinpoint clearing (0.2-0.8 mm in diameter). Others may be thin, closed (or only partially closed) halos or rings around a central, pinpoint clearing (0.2-0.8 mm in diameter). |
| Morphotype | Siphoviridae |
| Number of Genes | 106 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KR824843 |
| Refseq Number | None yet |
| Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
| Archiving Info |
| Archiving status |
Archived |
| SEA Designator |
2010VACUovechkinSAB |
| SEA Lysate Titer |
3.7e9 |
| Pitt Freezer Box# |
19 |
| Pitt Freezer Box Grid# |
78 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
