Mycobacterium phage Doomphist
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Detailed Information for Phage Doomphist
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJoseph Angstman
Year Found2017
Location FoundBismarck, ND USA
Finding InstitutionUniversity of Mary
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates46.725556 N, 100.758611 W Map
Discovery NotesTaken from dampened soil near a small stream. Soil was soft, and almost clay-like. Flora around was abundant and flowing with life.
Naming NotesNamed it after my Overwatch character Doomfist.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 31, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2871
Genome length (bp)58666
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGACGGCGC
GC Content61.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Renaud18 (None)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sandalphon (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionUniversity of Mary
Annotation StatusIn GenBank
Plaque NotesMedium sized, well-rounded phages
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Doomphist_1
(terminase, small subunit)

Doomphist_2
(terminase, large subunit)

Doomphist_3
(portal protein)

Doomphist_4
(capsid maturation protease)

Doomphist_5
(scaffolding protein)

Doomphist_6
(major capsid protein)

Doomphist_7
(head-to-tail adaptor)

Doomphist_8
(head-to-tail stopper)

Doomphist_9

Doomphist_10
(tail terminator)

Doomphist_11
(major tail protein)

Doomphist_12
(tail assembly chaperone)

Doomphist_13
(tail assembly chaperone)

Doomphist_14
(tape measure protein)

Doomphist_15
(minor tail protein)

Doomphist_16
(minor tail protein)

Doomphist_17
(minor tail protein)

Doomphist_18
(minor tail protein)

Doomphist_19
(minor tail protein, D-ala-D-ala carboxypeptidase)

Doomphist_20
(minor tail protein)

Doomphist_21

Doomphist_22

Doomphist_23

Doomphist_24

Doomphist_25

Doomphist_26

Doomphist_27

Doomphist_28
(membrane protein)

Doomphist_29

Doomphist_30
(lysin A)

Doomphist_31
(lysin B)

Doomphist_32
(holin)

Doomphist_33
(membrane protein)

Doomphist_34

Doomphist_35
(DnaQ-like (DNA polymerase III subunit))

Doomphist_36

Doomphist_37

Doomphist_38
(membrane protein)

Doomphist_39

Doomphist_40
(membrane protein)

Doomphist_41

Doomphist_42
(transposase)

Doomphist_43
(tyrosine integrase)

Doomphist_44
(membrane protein)

Doomphist_45
(immunity repressor)

Doomphist_46
(Cro (control of repressor's operator))

Doomphist_47
(antirepressor)

Doomphist_48

Doomphist_49
(excise)

Doomphist_50

Doomphist_51

Doomphist_52

Doomphist_53

Doomphist_54

Doomphist_55

Doomphist_56
(membrane protein)

Doomphist_57
(WhiB family transcription factor)

Doomphist_58

Doomphist_59
(WhiB family transcription factor)

Doomphist_60
(helix-turn-helix DNA binding domain)

Doomphist_61

Doomphist_62

Doomphist_63

Doomphist_64

Doomphist_65
(HNH endonuclease)

Doomphist_66

Doomphist_67

Doomphist_68

Doomphist_69

Doomphist_70

Doomphist_71
(exonuclease)

Doomphist_72

Doomphist_73
(DNA methylase)

Doomphist_74

Doomphist_75

Doomphist_76

Doomphist_77
(DNA methylase)

Doomphist_78

Doomphist_79

Doomphist_80

Doomphist_81

Doomphist_82

Doomphist_83

Doomphist_84

Doomphist_85

Doomphist_86

Doomphist_87
(membrane protein)

Doomphist_88

Doomphist_89

Doomphist_90

Doomphist_91

Doomphist_92

Doomphist_93
(membrane protein)

Doomphist_94

Doomphist_95

Doomphist_96

Doomphist_97

Doomphist_98

Doomphist_99
(helix-turn-helix DNA binding domain)

Doomphist_100

Doomphist_101

Doomphist_102

Doomphist_103

Doomphist_104

Doomphist_105

Doomphist_106
(glycosyltransferase)

Doomphist_107

Doomphist_108
(glycosyltransferase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN428047
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 73
Pitt Freezer Box Grid# F10
Available Files
GenBank File for PhameratorDownload