Mycobacterium phage Veteran
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Detailed Information for Phage Veteran
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByLaura Shellooe
Year Found2012
Location FoundSpokane, WA USA
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates47.66805 N, 117.400492 W Map
Discovery NotesDate: 9-14-12
Time: 17:30
Location: Gonzaga University campus,flower bed, flat and not close to foot traffic
Depth: 3cm
Soil Moisture: moist soil
Temp: 28°C or 82°F
Naming NotesThe soil that the phage was isolated from was located in a garden planted to take the shape and design of the American flag. It was this and the fact that this phage survived the many dilutions and processes of isolation, that I named this phage Veteran.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 16, 2019
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage461
Genome length (bp)56147
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGAAGGCGC
GC Content61.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Soul22 (None)

Akhila (F1)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sandalphon (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionGonzaga University
Annotation StatusIn GenBank
Plaque NotesPlaque morphology was observed as showing plaques up to 3mm in diameter, depending on the concentration of plaques on the agar plates. The plaques had defined parameters with a cleared center and a build-up of bacteria around the edges of the plaques.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Veteran_1
(terminase small subunit)

Veteran_2
(terminase large subunit)

Veteran_3
(portal protein)

Veteran_4
(capsid maturation protease)

Veteran_5
(scaffolding protein)

Veteran_6
(major capsid protein)

Veteran_7
(head-to-tail adaptor)

Veteran_8
(head-to-tail stopper)

Veteran_9

Veteran_10
(tail terminator)

Veteran_11
(major tail protein)

Veteran_12
(tail assembly chaperone)

Veteran_13
(tail assembly chaperone)

Veteran_14
(tape measure protein)

Veteran_15
(minor tail protein)

Veteran_16
(minor tail protein)

Veteran_17
(minor tail protein)

Veteran_18
(minor tail protein)

Veteran_19
(minor tail protein)

Veteran_20
(minor tail protein)

Veteran_21

Veteran_22

Veteran_23

Veteran_24

Veteran_25
(helix-turn-helix DNA binding domain protein)

Veteran_26

Veteran_27

Veteran_28

Veteran_29

Veteran_30
(lysin A)

Veteran_31
(lysin B)

Veteran_32
(holin)

Veteran_33

Veteran_34

Veteran_35
(DNA polymerase III subunit)

Veteran_36

Veteran_37

Veteran_38

Veteran_39

Veteran_40
(helix-turn-helix DNA binding domain protein)

Veteran_41
(tyrosine integrase)

Veteran_42

Veteran_43
(immunity repressor)

Veteran_44
(Cro protein)

Veteran_45
(antirepressor)

Veteran_46

Veteran_47
(excise)

Veteran_48

Veteran_49

Veteran_50

Veteran_51

Veteran_52

Veteran_53

Veteran_54
(WhiB family transcription factor)

Veteran_55

Veteran_56
(WhiB family transcription factor)

Veteran_57
(helix-turn-helix DNA binding domain protein)

Veteran_58

Veteran_59

Veteran_60

Veteran_61

Veteran_62
(HNH endonuclease)

Veteran_63
(DNA helicase)

Veteran_64

Veteran_65

Veteran_66
(G-I-Y Y-I-G endonuclease)

Veteran_67
(helix-turn-helix DNA binding domain protein)

Veteran_68

Veteran_69

Veteran_70

Veteran_71

Veteran_72

Veteran_73

Veteran_74

Veteran_75
(MPME 1 protein)

Veteran_76

Veteran_77

Veteran_78

Veteran_79

Veteran_80

Veteran_81

Veteran_82

Veteran_83

Veteran_84
(G-I-Y Y-I-G endonuclease)

Veteran_85

Veteran_86

Veteran_87

Veteran_88

Veteran_89

Veteran_90

Veteran_91
(glycosyltransferase)

Veteran_92

Veteran_93
(glycosyltransferase)

Veteran_94
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT114164
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator 2012GONZveteranLTS
Pitt Freezer Box# 36
Pitt Freezer Box Grid# 14
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload