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Schueller (B1) Casbah (B3) Tiri (K1) Mopey (D1) Ligma (DR)
Mycobacterium phage MadMen
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Detailed Information for Phage MadMen
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesMandMz
Found ByMadison Mendez
Year Found2020
Location FoundWilliamsburg, VA USA
Finding InstitutionCollege of William & Mary
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature22°C
GPS Coordinates37.2719 N, 76.7165 W Map
Discovery NotesI collected this sample on one of the trails in between the ISC and Sadler center. It was near a little creek with the small bridge.
Naming NotesThe first three letters of my first and last name are "Mad" and "Men."
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 7, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage14
Genome length (bp)57759
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGAAGGCGC
GC Content61.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

Click to View

Soul22 (None)

Akhila (F1)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Eradicator (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

GigiOuiOui (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

JalFarm20 (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

Leozinho (F1)

Leperchaun (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Madiba (F1)

MadMen (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

Rita (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sabbb (F1)

Sandalphon (F1)

Sarma624 (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tootsieroll (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

VRedHorse (F1)

Wachhund (F1)

Wee (F1)

Whatsapiecost (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Zizzle (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionCollege of William & Mary
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

MadMen_1
(terminase, small subunit)

MadMen_2
(terminase, large subunit)

MadMen_3
(portal protein)

MadMen_4
(capside maturate protease)

MadMen_5
(scaffolding protein)

MadMen_6
(major capsid protein)

MadMen_7
(head-to-tail adaptor)

MadMen_8
(head-to-tail stopper)

MadMen_9

MadMen_10
(tail terminator)

MadMen_11
(major tail protein)

MadMen_12
(tail assembly chaperone)

MadMen_13
(tail assembly chaperone)

MadMen_14
(tape measure protein)

MadMen_15
(minor tail protein)

MadMen_16
(minor tail protein)

MadMen_17

MadMen_18

MadMen_19
(minor tail protein)

MadMen_20
(minor tail protein)

MadMen_21
(minor tail protein)

MadMen_22

MadMen_23

MadMen_24

MadMen_25

MadMen_26

MadMen_27
(lysin A)

MadMen_28

MadMen_29
(lysin B)

MadMen_30
(holin)

MadMen_31

MadMen_32

MadMen_33
(DnaQ-like (DNA polymerase III subunit))

MadMen_34

MadMen_35

MadMen_36

MadMen_37

MadMen_38
(tyrosine integrase)

MadMen_39

MadMen_40
(immunity repressor)

MadMen_41
(Cro (control of repressor's operator))

MadMen_42
(antirepressor)

MadMen_43

MadMen_44
(excise)

MadMen_45

MadMen_46

MadMen_47

MadMen_48

MadMen_49

MadMen_50

MadMen_51

MadMen_52

MadMen_53

MadMen_54

MadMen_55
(WhiB family transcription factor)

MadMen_56

MadMen_57
(WhiB family transciption factor)

MadMen_58
(helix-turn-helix DNA binding domain)

MadMen_59

MadMen_60

MadMen_61

MadMen_62

MadMen_63

MadMen_64
(RecA-like DNA Recombinase)

MadMen_65
(HNH endonuclease)

MadMen_66
(DNA methylase)

MadMen_67
(HNH endonuclease)

MadMen_68

MadMen_69

MadMen_70

MadMen_71

MadMen_72

MadMen_73

MadMen_74

MadMen_75

MadMen_76

MadMen_77

MadMen_78

MadMen_79

MadMen_80

MadMen_81
(mycobacteriophage mobile element 1 (MPME 1))

MadMen_82

MadMen_83

MadMen_84

MadMen_85

MadMen_86

MadMen_87

MadMen_88

MadMen_89

MadMen_90

MadMen_91

MadMen_92

MadMen_93

MadMen_94

MadMen_95

MadMen_96

MadMen_97

MadMen_98
(G-I-Y Y-I-G endonuclease)

MadMen_99

MadMen_100

MadMen_101

MadMen_102

MadMen_103

MadMen_104

MadMen_105

MadMen_106
(glycosyltransferase)

MadMen_107

MadMen_108
(glycosyltransferase)

MadMen_109
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ747512
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 121
Pitt Freezer Box Grid# B9
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload