Mycobacterium phage Mantra
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Detailed Information for Phage Mantra
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByClark Straub
Year Found2008
Location FoundSanta Cruz, CA USA
Finding InstitutionUniversity of California, Santa Cruz
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates36.9989 N, 122.052533 W Map
Discovery NotesTaken from soil 3-5 cm deep near a row of Zinnias in Merrill Gardens on the UCSC campus
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 8, 2011
Genome length (bp)57001
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGAAGGCGC
GC Content61.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Blarby (None)

MulchSalad (None)

Akhila (F1)

Alexphander (F1)

AlpineSix (F1)

ArcusAngelus (F1)

Ardmore (F1)

Aubs (F1)

Awesomesauce (F1)

Batiatus (F1)

Beakin (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BlueCrab (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chevrolet (F1)

ChickenDinner (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Crumble (F1)

DaddyRickover (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

Deb65 (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

DocMcStuffins (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DosHalletts (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Eradicator (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

FreddyB (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

GigiOuiOui (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Guppsters (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

IbOuu (F1)

Inventum (F1)

IrishSherpFalk (F1)

JalFarm20 (F1)

James (F1)

Jarcob (F1)

Jinglebell (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Juniper1 (F1)

Karhdo (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

Leozinho (F1)

Leperchaun (F1)

LilMoolah (F1)

LittleShirley (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

LunaBlu (F1)

Madiba (F1)

MadMen (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Maravista (F1)

Marker (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Ms6 (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

Oksu (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phalconet (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

PhesterPhotato (F1)

Philus (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Radiance (F1)

Ramsey (F1)

RedBird (F1)

Rialto (F1)

Rita (F1)

RitaG (F1)

Rockne (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sabbb (F1)

Sandalphon (F1)

Sarma624 (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

ShowerHandel (F1)

ShroomBoi (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Stap (F1)

Starcevich (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tootsieroll (F1)

Totinger (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

VRedHorse (F1)

Wachhund (F1)

Wee (F1)

Whatsapiecost (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Yorick (F1)

Zerg (F1)

Zizzle (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Soul22 (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

LunaStella (F4)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesClear
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Mantra_1

Mantra_2
(terminase)

Mantra_3
(portal protein)

Mantra_4
(capsid maturation protease)

Mantra_5
(scaffolding protein)

Mantra_6
(major capsid protein)

Mantra_7
(head-to-tail adaptor)

Mantra_8
(head-to-tail stopper)

Mantra_9

Mantra_10
(tail terminator)

Mantra_11
(major tail protein)

Mantra_12
(tail assembly chaperone)

Mantra_13
(tail assembly chaperone)

Mantra_14
(tape measure protein)

Mantra_15
(minor tail protein)

Mantra_16
(minor tail protein)

Mantra_17

Mantra_18
(minor tail protein)

Mantra_19
(minor tail protein)

Mantra_20

Mantra_21

Mantra_22

Mantra_23

Mantra_24

Mantra_25

Mantra_26

Mantra_27

Mantra_28

Mantra_29

Mantra_30
(lysin A)

Mantra_31
(lysin B)

Mantra_32

Mantra_33

Mantra_34

Mantra_35
(DnaQ-like DNA polymerase III subunit)

Mantra_36

Mantra_37

Mantra_38

Mantra_39

Mantra_40
(tyrosine integrase)

Mantra_41

Mantra_42
(immunity repressor)

Mantra_43

Mantra_44

Mantra_45

Mantra_46

Mantra_47

Mantra_48

Mantra_49

Mantra_50

Mantra_51

Mantra_52

Mantra_53
(WhiB family transcription factor)

Mantra_54

Mantra_55
(WhiB family transcription factor)

Mantra_56

Mantra_57

Mantra_58

Mantra_59

Mantra_60

Mantra_61

Mantra_62
(HNH endonuclease)

Mantra_63

Mantra_64

Mantra_65

Mantra_66

Mantra_67

Mantra_68

Mantra_69

Mantra_70

Mantra_71

Mantra_72

Mantra_73

Mantra_74

Mantra_75

Mantra_76

Mantra_77

Mantra_78

Mantra_79

Mantra_80

Mantra_81

Mantra_82

Mantra_83

Mantra_84

Mantra_85

Mantra_86

Mantra_87

Mantra_88

Mantra_89

Mantra_90

Mantra_91
(G-I-Y-Y-I-G endonuclease)

Mantra_92

Mantra_93

Mantra_94

Mantra_95

Mantra_96

Mantra_97

Mantra_98
(galactosyltransferase)

Mantra_99

Mantra_100

Mantra_101
(glycosyltransferase)

Mantra_102
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH590596
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
SEA Designator 2008UCSCmantraCS
SEA Lysate Titer 6.0x10^10
Pitt Freezer Box# 6
Pitt Freezer Box Grid# 77
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload