Mycobacterium phage Nivrat
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Detailed Information for Phage Nivrat
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByCasey Tarvin
Year Found2017
Location FoundCharlotte, NC USA
Finding InstitutionQueens University of Charlotte
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature20°C
GPS Coordinates35.189804 N, 80.834187 W Map
Naming NotesMy last name backwards.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 20, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1768
Genome length (bp)58009
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGAAGGCGC
GC Content61.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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AbbyNormal (None)

Grib (None)

Kishmeesh (None)

KitCat (None)

MightyMorph (None)

Puck (None)

Renaud18 (None)

WIVsmall1220 (None)

Alexphander (F1)

Anaxagorus (F1)

Ant1Dodson (F1)

ArcusAngelus (F1)

Ardmore (F1)

Arienne (F1)

Asmart (F1)

Awesomesauce (F1)

BabytheFifth (F1)

Barson (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

BoomCrackaPop (F1)

Boomer (F1)

Braemar (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

Cakepop (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chhibber (F1)

Chikondi (F1)

Chuckly (F1)

Clifton (F1)

Clover (F1)

CoolGuy (F1)

Cornucopia (F1)

Daenerys (F1)

Danda (F1)

Dante (F1)

DaWorst (F1)

DCrust15 (F1)

DeadP (F1)

Desmond (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Docouto (F1)

Dorothy (F1)

DotProduct (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Estella (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Freddie4 (F1)

Fruitloop (F1)

FunOne (F1)

Galactic (F1)

Gardregs (F1)

Gendisarray (F1)

Genesis (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GreatPumpkin (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Judylove (F1)

Kalikimaka (F1)

Katya (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

Latretium (F1)

LillyLatzon (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Lysinator (F1)

MacDrage (F1)

Mahavrat (F1)

Mantra (F1)

Mattes (F1)

McDiddy (F1)

Melissauren88 (F1)

MerrillCO18 (F1)

Mille (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Mozy (F1)

Ms6 (F1)

Mutaforma13 (F1)

Myosotis (F1)

Nemain (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

Noodle (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peanut21s (F1)

Phabio (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

PhrankthaTank (F1)

Piper2020 (F1)

Pippy (F1)

Plackberry (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

Prometheus (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

Rocktrap (F1)

RockyHorror (F1)

Rombolo (F1)

Royals2015 (F1)

Ruby (F1)

S2Kari (F1)

S2TSquared (F1)

Saal (F1)

SaltyMike (F1)

Sandalphon (F1)

SassyB (F1)

Scottish (F1)

Seagreen (F1)

SG4 (F1)

Sharpshooter (F1)

Shauna1 (F1)

SherL (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

Taus (F1)

TDanisky (F1)

TonaldTDrump (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Wachhund (F1)

Wee (F1)

WheatBerry18 (F1)

Whouxphf (F1)

WillSterrel (F1)

WIVsmall (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotation StatusIn GenBank
Plaque NotesSmall and cloudy
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Nivrat_1
(terminase small subunit)

Nivrat_2
(terminase large subunit)

Nivrat_3
(portal protein)

Nivrat_4
(capsid maturation protease)

Nivrat_5
(scaffolding protein)

Nivrat_6
(major capsid protein)

Nivrat_7

Nivrat_8

Nivrat_9

Nivrat_10

Nivrat_11
(major tail protein)

Nivrat_12
(tail assembly chaperone)

Nivrat_13
(tail assembly chaperone)

Nivrat_14
(tape measure protein)

Nivrat_15
(minor tail protein)

Nivrat_16
(minor tail protein)

Nivrat_17
(minor tail protein)

Nivrat_18
(minor tail protein)

Nivrat_19
(minor tail protein)

Nivrat_20
(minor tail protein)

Nivrat_21
(minor tail protein)

Nivrat_22

Nivrat_23
(minor tail protein)

Nivrat_24
(minor tail protein)

Nivrat_25

Nivrat_26

Nivrat_27

Nivrat_28

Nivrat_29

Nivrat_30
(lysin A)

Nivrat_31
(lysin B)

Nivrat_32
(holin)

Nivrat_33

Nivrat_34

Nivrat_35
(DNA polymerase III subunit)

Nivrat_36

Nivrat_37

Nivrat_38

Nivrat_39

Nivrat_40

Nivrat_41

Nivrat_42
(integrase)

Nivrat_43

Nivrat_44

Nivrat_45
(antirepressor)

Nivrat_46

Nivrat_47

Nivrat_48

Nivrat_49

Nivrat_50

Nivrat_51

Nivrat_52

Nivrat_53
(WhiB family transcription factor)

Nivrat_54

Nivrat_55
(WhiB family transcription factor)

Nivrat_56
(helix-turn-helix DNA binding domain protein)

Nivrat_57

Nivrat_58

Nivrat_59

Nivrat_60

Nivrat_61

Nivrat_62

Nivrat_63

Nivrat_64

Nivrat_65

Nivrat_66

Nivrat_67

Nivrat_68

Nivrat_69

Nivrat_70

Nivrat_71

Nivrat_72

Nivrat_73

Nivrat_74

Nivrat_75

Nivrat_76

Nivrat_77

Nivrat_78

Nivrat_79

Nivrat_80

Nivrat_81

Nivrat_82

Nivrat_83

Nivrat_84

Nivrat_85

Nivrat_86

Nivrat_87

Nivrat_88

Nivrat_89

Nivrat_90

Nivrat_91
(G-I-Y-Y-I-G endonuclease)

Nivrat_92

Nivrat_93

Nivrat_94

Nivrat_95

Nivrat_96

Nivrat_97

Nivrat_98

Nivrat_99

Nivrat_100

Nivrat_101
(glycosyltransferase)

Nivrat_102

Nivrat_103
(glycosyltransferase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH651183
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2x10^10
Pitt Freezer Box# 58
Pitt Freezer Box Grid# F11
Available Files
GenBank File for PhameratorDownload