Mycobacterium phage Hlubikazi
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Hlubikazi
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAwonke Makholwa
Year Found2018
Location FoundDurban, South Africa
Finding InstitutionUniversity of Kwazulu-Natal
ProgramMycobacterial Genetics Course, Durban, South Africa
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates29.865299 S, 30.984579 E Map
Discovery NotesUniversity of Kwa-Zulu Natal, Westville campus between the H Joosub Hall and the Library building but closer to the library building.
Naming NotesThe amaHlubi are a South African ethnic group. For at least two centuries they have been a part of the Nguni, Mbo or Lala nation. They are found in the Republic of South Africa in the KwaZulu-Natal, Eastern Cape and North West provinces. a child named afater the amaHlubi tribe is Hlubi(male) and Hubikazi(female).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 26, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage658
Genome length (bp)55471
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGACGGCGC
GC Content61.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

Click to View

Soul22 (None)

Akhila (F1)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sandalphon (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionUniversity of Kwazulu-Natal
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Hlubikazi_1
(terminase, small subunit)

Hlubikazi_2
(terminase, large subunit)

Hlubikazi_3
(portal protein)

Hlubikazi_4
(capsid maturation protease)

Hlubikazi_5
(scaffolding protein)

Hlubikazi_6
(major capsid protein)

Hlubikazi_7
(head-to-tail adaptor)

Hlubikazi_8
(head-to-tail stopper)

Hlubikazi_9

Hlubikazi_10
(tail terminator)

Hlubikazi_11
(major tail protein)

Hlubikazi_12
(tail assembly chaperone)

Hlubikazi_13
(tail assembly chaperone)

Hlubikazi_14
(tape measure protein)

Hlubikazi_15
(minor tail protein)

Hlubikazi_16
(minor tail protein)

Hlubikazi_17
(minor tail protein)

Hlubikazi_18
(minor tail protein)

Hlubikazi_19
(minor tail protein, D-ala-D-ala carboxypeptidase)

Hlubikazi_20
(minor tail protein)

Hlubikazi_21

Hlubikazi_22

Hlubikazi_23

Hlubikazi_24

Hlubikazi_25
(helix-turn-helix DNA binding domain)

Hlubikazi_26

Hlubikazi_27

Hlubikazi_28

Hlubikazi_29

Hlubikazi_30
(lysin A)

Hlubikazi_31
(HNH endonuclease)

Hlubikazi_32
(lysin B)

Hlubikazi_33

Hlubikazi_34

Hlubikazi_35

Hlubikazi_36
(DnaQ-like (DNA polymerase III subunit))

Hlubikazi_37

Hlubikazi_38

Hlubikazi_39

Hlubikazi_40

Hlubikazi_41
(tyrosine integrase)

Hlubikazi_42

Hlubikazi_43
(immunity repressor)

Hlubikazi_44
(Cro (control of repressor's operator))

Hlubikazi_45

Hlubikazi_46

Hlubikazi_47
(excise)

Hlubikazi_48

Hlubikazi_49
(helix-turn-helix DNA binding domain)

Hlubikazi_50

Hlubikazi_51

Hlubikazi_52

Hlubikazi_53
(WhiB family transcription factor)

Hlubikazi_54

Hlubikazi_55
(WhiB family transcription factor)

Hlubikazi_56
(helix-turn-helix DNA binding domain)

Hlubikazi_57

Hlubikazi_58

Hlubikazi_59

Hlubikazi_60

Hlubikazi_61
(HNH endonuclease)

Hlubikazi_62

Hlubikazi_63

Hlubikazi_64

Hlubikazi_65

Hlubikazi_66

Hlubikazi_67
(DNA helicase)

Hlubikazi_68

Hlubikazi_69

Hlubikazi_70

Hlubikazi_71

Hlubikazi_72

Hlubikazi_73

Hlubikazi_74

Hlubikazi_75

Hlubikazi_76

Hlubikazi_77

Hlubikazi_78

Hlubikazi_79

Hlubikazi_80

Hlubikazi_81

Hlubikazi_82

Hlubikazi_83

Hlubikazi_84

Hlubikazi_85

Hlubikazi_86

Hlubikazi_87

Hlubikazi_88

Hlubikazi_89

Hlubikazi_90

Hlubikazi_91
(G-I-Y-Y-I-G endonuclease)

Hlubikazi_92

Hlubikazi_93

Hlubikazi_94

Hlubikazi_95

Hlubikazi_96

Hlubikazi_97

Hlubikazi_98

Hlubikazi_99
(glycosyltransferase)

Hlubikazi_100

Hlubikazi_101
(glycosyltransferse)

Hlubikazi_102
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT684601
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload