Mycobacterium phage Scottish
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Scottish
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByOlivia Cummings
Year Found2015
Location FoundProvidence, RI USA
Finding InstitutionBrown University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.824167 N, 71.403333 W Map
Discovery NotesScottish was found on 9/11/2015 in moist soil (it had rained the day before). The soil was located in Keeney Quad, about 2cm under a tree.
Naming NotesThe unofficial name of Scottish is "The Scottish Phage," which is a play on a superstitious name for Shakespeare's "Macbeth," "The Scottish Play." Like "Macbeth," Scottish (the phage) is quick, aggressive, and does not turn out well (for M. Smeg in this case).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 8, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1041
Genome length (bp)56825
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGACGGCGC
GC Content61.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

Click to View

Soul22 (None)

Akhila (F1)

Alexphander (F1)

ArcusAngelus (F1)

Ardmore (F1)

Awesomesauce (F1)

Batiatus (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Estave1 (F1)

Fancypants (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

Inventum (F1)

IrishSherpFalk (F1)

James (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

LilMoolah (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Ramsey (F1)

RitaG (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sandalphon (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

Wachhund (F1)

Wee (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Zerg (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Annotating InstitutionRockland Community College
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Scottish_1
(terminase small subunit)

Scottish_2
(terminase large subunit)

Scottish_3
(portal protein)

Scottish_4
(capsid maturation protease)

Scottish_5
(scaffolding protein)

Scottish_6
(major capsid protein)

Scottish_7
(head-to-tail adaptor)

Scottish_8
(head-to-tail stopper)

Scottish_9

Scottish_10
(tail terminator)

Scottish_11
(major tail protein)

Scottish_12
(tail assembly chaperone)

Scottish_13
(tail assembly chaperone)

Scottish_14
(tape measure protein)

Scottish_15
(transposase)

Scottish_16
(minor tail protein)

Scottish_17
(minor tail protein)

Scottish_18
(minor tail protein)

Scottish_19
(minor tail protein)

Scottish_20
(minor tail protein)

Scottish_21
(minor tail protein)

Scottish_22

Scottish_23

Scottish_24

Scottish_25

Scottish_26
(helix-turn-helix DNA binding domain protein)

Scottish_27

Scottish_28

Scottish_29

Scottish_30

Scottish_31
(lysin A)

Scottish_32
(lysin B)

Scottish_33

Scottish_34

Scottish_35

Scottish_36
(DNA polymerase III subunit)

Scottish_37

Scottish_38

Scottish_39

Scottish_40

Scottish_41

Scottish_42

Scottish_43
(tyrosine integrase)

Scottish_44

Scottish_45

Scottish_46
(immunity repressor)

Scottish_47
(Cro protein)

Scottish_48

Scottish_49
(excise)

Scottish_50

Scottish_51

Scottish_52

Scottish_53

Scottish_54

Scottish_55
(WhiB family transcription factor)

Scottish_56
(helix-turn-helix DNA binding domain protein)

Scottish_57
(WhiB family transcription factor)

Scottish_58
(helix-turn-helix DNA binding domain protein)

Scottish_59

Scottish_60

Scottish_61

Scottish_62
(RecA-like DNA recombinase)

Scottish_63

Scottish_64
(HNH endonuclease)

Scottish_65

Scottish_66

Scottish_67
(exonuclease)

Scottish_68
(DNA methylase)

Scottish_69
(DNA methylase)

Scottish_70

Scottish_71

Scottish_72
(DNA methylase)

Scottish_73

Scottish_74

Scottish_75

Scottish_76

Scottish_77

Scottish_78

Scottish_79

Scottish_80

Scottish_81

Scottish_82

Scottish_83

Scottish_84

Scottish_85

Scottish_86

Scottish_87

Scottish_88

Scottish_89

Scottish_90

Scottish_91

Scottish_92

Scottish_93

Scottish_94
(MerR-like helix-turn-helix DNA binding domain protein)

Scottish_95

Scottish_96

Scottish_97

Scottish_98

Scottish_99

Scottish_100

Scottish_101
(glycosyltransferase)

Scottish_102

Scottish_103

Scottish_104
(glycosyltransferase)

Scottish_105
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN735433
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload