Mycobacterium phage DeadP
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage DeadP
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Duplicates of this PhageOrpheus, Toola
Found ByAmenawon Ogiefo
Year Found2009
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.439921 N, 79.952987 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 4, 2011
Genome length (bp)56461
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGAAGGCGC
GC Content61.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

Click to View

Blarby (None)

MulchSalad (None)

Akhila (F1)

Alexphander (F1)

AlpineSix (F1)

ArcusAngelus (F1)

Ardmore (F1)

Aubs (F1)

Awesomesauce (F1)

Batiatus (F1)

Beakin (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BlueCrab (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chevrolet (F1)

ChickenDinner (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Crumble (F1)

DaddyRickover (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

Deb65 (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

DocMcStuffins (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DosHalletts (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Eradicator (F1)

Estave1 (F1)

Fancypants (F1)

Fastidio (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

FreddyB (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

GigiOuiOui (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Guppsters (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

IbOuu (F1)

IMpilo (F1)

Inventum (F1)

IrishSherpFalk (F1)

JalFarm20 (F1)

James (F1)

Jarcob (F1)

Jinglebell (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Juniper1 (F1)

Karhdo (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

Leozinho (F1)

Leperchaun (F1)

LilMoolah (F1)

LittleShirley (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

LunaBlu (F1)

Madiba (F1)

MadMen (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Maravista (F1)

Marker (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Ms6 (F1)

MulchExplorer (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

Oksu (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phalconet (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

PhesterPhotato (F1)

Philus (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Radiance (F1)

Ramsey (F1)

RedBird (F1)

Rialto (F1)

Rita (F1)

RitaG (F1)

Rockne (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sabbb (F1)

Sandalphon (F1)

Sarma624 (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

ShowerHandel (F1)

ShroomBoi (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Stap (F1)

Starcevich (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tootsieroll (F1)

Totinger (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

VRedHorse (F1)

Wachhund (F1)

Wee (F1)

Whatsapiecost (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Yorick (F1)

Zerg (F1)

Zizzle (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Soul22 (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

LunaStella (F4)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Toron (F6)

Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes106
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

DeadP_1
(terminase small subunit)

DeadP_2
(terminase large subunit)

DeadP_3
(portal protein)

DeadP_4
(capsid maturation protease)

DeadP_5
(scaffolding protein)

DeadP_6
(major capsid protein)

DeadP_7
(head-to-tail adaptor)

DeadP_8
(head-to-tail stopper)

DeadP_9

DeadP_10
(tail terminator)

DeadP_11
(major tail subunit)

DeadP_12
(tail assembly chaperone)

DeadP_13
(tail assembly chaperone)

DeadP_14
(tape measure protein)

DeadP_15

DeadP_16
(minor tail protein)

DeadP_17

DeadP_18
(minor tail subunit)

DeadP_19
(D-Ala-D-Ala carboxypeptidase)

DeadP_20

DeadP_21

DeadP_22

DeadP_23

DeadP_24

DeadP_25

DeadP_26

DeadP_27

DeadP_28

DeadP_29

DeadP_30
(lysin A)

DeadP_31
(lysin B)

DeadP_32
(holin)

DeadP_33

DeadP_34

DeadP_35
(DnaQ-like DNA polymerase III subunit)

DeadP_36

DeadP_37

DeadP_38

DeadP_39

DeadP_40

DeadP_41

DeadP_42

DeadP_43

DeadP_44

DeadP_45

DeadP_46
(integrase)

DeadP_47

DeadP_48

DeadP_49

DeadP_50
(HTH domain protein)

DeadP_51

DeadP_52

DeadP_53

DeadP_54

DeadP_55

DeadP_56

DeadP_57

DeadP_58

DeadP_59

DeadP_60

DeadP_61

DeadP_62

DeadP_63
(WhiB)

DeadP_64

DeadP_65
(WhiB)

DeadP_66
(HTH domain protein)

DeadP_67

DeadP_68

DeadP_69

DeadP_70
(AAA-ATPase)

DeadP_71

DeadP_72
(HNH domain protein)

DeadP_73

DeadP_74

DeadP_75

DeadP_76

DeadP_77

DeadP_78

DeadP_79

DeadP_80

DeadP_81

DeadP_82

DeadP_83

DeadP_84

DeadP_85

DeadP_86

DeadP_87

DeadP_88

DeadP_89

DeadP_90

DeadP_91

DeadP_92

DeadP_93

DeadP_94

DeadP_95
(MerR domain protein)

DeadP_96

DeadP_97

DeadP_98

DeadP_99

DeadP_100

DeadP_101
(Ser/Thr kinase)

DeadP_102

DeadP_103
(glycosyltransferase)

DeadP_104

DeadP_105

DeadP_106
(N-acetylglucosaminyltransferase)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJN698996
Refseq NumberNC_023728
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 1
Pitt Freezer Box Grid# F4
Available Files
EM PictureDownload
Final DNAMaster FileDownload