The Actinobacteriophage Database | Phage Demsculpinboyz

Mycobacterium phage Demsculpinboyz

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Detailed Information for Phage Demsculpinboyz
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Patricia Schellhammer
Year Found	2016
Location Found	Livingston, AL USA
Finding Institution	University of West Alabama
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	No
Isolation Temperature	Not entered
GPS Coordinates	32.594337 N, 88.186615 W Map
Discovery Notes	Orchard, base of pear tree, early morning 10:30AM, dry soil
Naming Notes	A term we use in our lab because we work on Banded Sculpin
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Dec 9, 2016
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Illumina Sequencing
Genome length (bp)	57437
Character of genome ends	Unknown
Overhang Length	10 bases
Overhang Sequence	CTCAGGGCAT
GC Content	60.9%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	F
Subcluster	F2
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View Blarby (None) MulchSalad (None) Akhila (F1) Alexphander (F1) AlpineSix (F1) ArcusAngelus (F1) Ardmore (F1) Aubs (F1) Awesomesauce (F1) Batiatus (F1) Beakin (F1) BigPhil (F1) Bipolar (F1) Blexus (F1) BlueCrab (F1) BobaPhett (F1) Bobi (F1) BodEinwohner17 (F1) Boomer (F1) Brocalys (F1) Bubbles123 (F1) Burwell21 (F1) BuzzLyseyear (F1) ByChance (F1) Byougenkin (F1) Cabrinians (F1) CaptainTrips (F1) Cerasum (F1) Che8 (F1) Chevrolet (F1) ChickenDinner (F1) Chuckly (F1) Clifton (F1) Coco12 (F1) Cornucopia (F1) Crumble (F1) DaddyRickover (F1) Daenerys (F1) Dante (F1) DaWorst (F1) DeadP (F1) Deb65 (F1) DillTech15 (F1) DirtMcgirt (F1) DLane (F1) DocMcStuffins (F1) Donkeykong (F1) Doomphist (F1) Dorothy (F1) DosHalletts (F1) DotProduct (F1) Doug (F1) Drago (F1) DRBy19 (F1) Eish (F1) EleanorGeorge (F1) Emma (F1) Empress (F1) Enby (F1) Eradicator (F1) Estave1 (F1) Fancypants (F1) Fastidio (F1) Filuzino (F1) Firehouse51 (F1) Flathead (F1) Florinda (F1) Frankie (F1) FreddyB (F1) Fruitloop (F1) Galactic (F1) Gandalph (F1) Geralt (F1) GigiOuiOui (F1) Girafales (F1) Girr (F1) Gorge (F1) GUmbie (F1) Guppsters (F1) Hades (F1) Hamulus (F1) Harley (F1) Hegedechwinu (F1) Hlubikazi (F1) Ibhubesi (F1) IbOuu (F1) IMpilo (F1) Inventum (F1) IrishSherpFalk (F1) JalFarm20 (F1) James (F1) Jarcob (F1) Jinglebell (F1) Job42 (F1) JoeyJr (F1) Juice456 (F1) Juniper1 (F1) Karhdo (F1) Kenuha5 (F1) Kersh (F1) Kimberlium (F1) KingMidas (F1) Kingsley (F1) Koella (F1) Krakatau (F1) KristaRAM (F1) LastJedi (F1) Latretium (F1) Leozinho (F1) Leperchaun (F1) LilMoolah (F1) LittleShirley (F1) Lizziana (F1) Llama (F1) Llij (F1) Lorde (F1) LunaBlu (F1) Madiba (F1) MadMen (F1) Mahavrat (F1) Mandlovu (F1) Mantra (F1) Maravista (F1) Marker (F1) Martik (F1) Mattes (F1) Melissauren88 (F1) MilanaBonita (F1) MilleniumForce (F1) MinionDave (F1) Minnie (F1) Misha28 (F1) MisterCuddles (F1) Modragons (F1) Moonbeam (F1) Mova (F1) Mozy (F1) Ms6 (F1) MulchExplorer (F1) Mutaforma13 (F1) Nimbo (F1) Nitzel (F1) Nivrat (F1) NormanBulbieJr (F1) Ochi17 (F1) OfUltron (F1) Ogopogo (F1) Oksu (F1) OldBen (F1) OlympiaSaint (F1) Ovechkin (F1) OwlsT2W (F1) Pacc40 (F1) Phalconet (F1) Phanphagia (F1) PHappiness (F1) Phasih (F1) Phatniss (F1) PhesterPhotato (F1) Philus (F1) Piper2020 (F1) Pippy (F1) Plumbus (F1) PMC (F1) Poenanya (F1) Polka14 (F1) Pollywog (F1) PopTart (F1) Priscilla (F1) QuickMath (F1) Quico (F1) Radiance (F1) Ramsey (F1) RedBird (F1) Rialto (F1) Rita (F1) RitaG (F1) Rockne (F1) RockyHorror (F1) Royals2015 (F1) Ruby (F1) Saal (F1) Sabbb (F1) Sandalphon (F1) Sarma624 (F1) Sassafras (F1) SassyB (F1) Scottish (F1) Seabastian (F1) Seagreen (F1) SG4 (F1) Shauna1 (F1) ShiLan (F1) ShowerHandel (F1) ShroomBoi (F1) SimranZ1 (F1) SiSi (F1) Sparkdehlily (F1) Spartacus (F1) Spikelee (F1) Spoonbill (F1) StAnnes (F1) Stap (F1) Starcevich (F1) Strokeseat (F1) SuperGrey (F1) SwagPigglett (F1) Taj (F1) TDanisky (F1) TootsiePop (F1) Tootsieroll (F1) Totinger (F1) Tweety (F1) UncleRicky (F1) Velveteen (F1) Veteran (F1) VRedHorse (F1) Wachhund (F1) Wee (F1) Whatsapiecost (F1) Whouxphf (F1) WillSterrel (F1) XFactor (F1) Yorick (F1) Zerg (F1) Zizzle (F1) Avani (F2) Che9d (F2) Demsculpinboyz (F2) Jabbawokkie (F2) Soul22 (F2) Yoshi (F2) Zapner (F2) Squirty (F3) LunaStella (F4) Renaud18 (F4) TChen (F4) ThetaBob (F4) Cornie (F5) Toron (F6)
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Morphotype	Siphoviridae
Number of Genes	117
Number of tRNAs	0
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View Demsculpinboyz_1 (HNH endonuclease) Demsculpinboyz_2 Demsculpinboyz_3 (terminase) Demsculpinboyz_4 (portal protein) Demsculpinboyz_5 (MuF-like minor capsid protein) Demsculpinboyz_6 (scaffolding protein) Demsculpinboyz_7 (major capsid protein) Demsculpinboyz_8 Demsculpinboyz_9 (head-to-tail adaptor) Demsculpinboyz_10 (head-to-tail stopper) Demsculpinboyz_11 Demsculpinboyz_12 Demsculpinboyz_13 Demsculpinboyz_14 (major tail protein) Demsculpinboyz_15 (tail assembly chaperone) Demsculpinboyz_16 (tail assembly chaperone) Demsculpinboyz_17 (tape measure protein) Demsculpinboyz_18 (minor tail protein) Demsculpinboyz_19 (minor tail protein) Demsculpinboyz_20 (minor tail protein) Demsculpinboyz_21 Demsculpinboyz_22 (minor tail protein) Demsculpinboyz_23 (minor tail protein) Demsculpinboyz_24 (minor tail protein) Demsculpinboyz_25 (minor tail protein) Demsculpinboyz_26 (minor tail protein) Demsculpinboyz_27 Demsculpinboyz_28 (helix-turn-helix DNA binding protein) Demsculpinboyz_29 Demsculpinboyz_30 Demsculpinboyz_31 Demsculpinboyz_32 Demsculpinboyz_33 Demsculpinboyz_34 Demsculpinboyz_35 (lysin A) Demsculpinboyz_36 (lysin B) Demsculpinboyz_37 Demsculpinboyz_38 Demsculpinboyz_39 Demsculpinboyz_40 Demsculpinboyz_41 Demsculpinboyz_42 Demsculpinboyz_43 Demsculpinboyz_44 Demsculpinboyz_45 Demsculpinboyz_46 Demsculpinboyz_47 Demsculpinboyz_48 (helix-turn-helix DNA binding protein) Demsculpinboyz_49 Demsculpinboyz_50 (tyrosine integrase) Demsculpinboyz_51 (G-I-Y Y-I-G endonuclease) Demsculpinboyz_52 Demsculpinboyz_53 Demsculpinboyz_54 Demsculpinboyz_55 (helix-turn-helix DNA binding protein) Demsculpinboyz_56 (antirepressor) Demsculpinboyz_57 Demsculpinboyz_58 Demsculpinboyz_59 Demsculpinboyz_60 Demsculpinboyz_61 Demsculpinboyz_62 Demsculpinboyz_63 Demsculpinboyz_64 Demsculpinboyz_65 Demsculpinboyz_66 Demsculpinboyz_67 (WhiB family transcription factor) Demsculpinboyz_68 (helix-turn-helix DNA binding protein) Demsculpinboyz_69 (helix-turn-helix DNA binding protein) Demsculpinboyz_70 (WhiB family transcription factor) Demsculpinboyz_71 (helix-turn-helix DNA binding protein) Demsculpinboyz_72 Demsculpinboyz_73 Demsculpinboyz_74 Demsculpinboyz_75 Demsculpinboyz_76 Demsculpinboyz_77 (AAA-ATPase) Demsculpinboyz_78 (HNH endonuclease) Demsculpinboyz_79 Demsculpinboyz_80 Demsculpinboyz_81 Demsculpinboyz_82 (PAPS reductase-like domain protein) Demsculpinboyz_83 Demsculpinboyz_84 Demsculpinboyz_85 Demsculpinboyz_86 Demsculpinboyz_87 Demsculpinboyz_88 Demsculpinboyz_89 Demsculpinboyz_90 Demsculpinboyz_91 Demsculpinboyz_92 Demsculpinboyz_93 Demsculpinboyz_94 Demsculpinboyz_95 Demsculpinboyz_96 Demsculpinboyz_97 Demsculpinboyz_98 Demsculpinboyz_99 Demsculpinboyz_100 Demsculpinboyz_101 Demsculpinboyz_102 Demsculpinboyz_103 Demsculpinboyz_104 Demsculpinboyz_105 Demsculpinboyz_106 (G-I-Y Y-I-G endonuclease) Demsculpinboyz_107 Demsculpinboyz_108 Demsculpinboyz_109 Demsculpinboyz_110 Demsculpinboyz_111 Demsculpinboyz_112 Demsculpinboyz_113 Demsculpinboyz_114 Demsculpinboyz_115 (glycosyltransferase) Demsculpinboyz_116 (glycosyltransferase) Demsculpinboyz_117 (glycosyltransferase)
Submitted Annotation in DNA Master Format	Download
Submitted Minimal DNA Master File	Download
Author List	Download
Annotation Cover Sheet	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	MF919502
Refseq Number	None yet
Published in Paper	Fast KM et al 2018, Genome Announcements: Genome Sequence of a Newly Isolated F2 Subcluster Mycobacteriophage from the Black Belt Geological Region of Western Alabama
Archiving Info
Archiving status	Archived
SEA Lysate Titer	7.4x10^9
Pitt Freezer Box#	32
Pitt Freezer Box Grid#	A8
Available Files
EM Picture	Download
GenBank File for Phamerator	Download

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