Mycobacterium phage Emmaloid
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Detailed Information for Phage Emmaloid
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesChemicalX
Found ByAndrew Burrows
Year Found2024
Location FoundHighland, UT United States
Finding InstitutionBrigham Young University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature31°C
GPS Coordinates40.401194 N, 111.77225 W Map
Discovery NotesI found it in a pile of farming compost at Carlisle Farms, Highland UT.
Naming NotesI named it after my lovely girlfriend.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 10, 2025
Sequencing FacilityCD Genomics
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NovaSeq X Plus
Read TypePaired-end reads
Read Length150 bp
Approximate Shotgun Coverage6052
Genome length (bp)57713
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCCGATGGCAT
GC Content61.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Blarby (None)

Akhila (F1)

Alexphander (F1)

Aloeri (F1)

AlpineSix (F1)

ArcusAngelus (F1)

Ardmore (F1)

Aubs (F1)

Awesomesauce (F1)

Batiatus (F1)

Beakin (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BlueCrab (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Brookers (F1)

Brushbloom (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Cheesepuff (F1)

Chevrolet (F1)

ChickenDinner (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Corium (F1)

Cornucopia (F1)

Crumble (F1)

DaddyRickover (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

Deb65 (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

DocMcStuffins (F1)

Donkeykong (F1)

Doomphist (F1)

DoRead (F1)

Dorothy (F1)

DosHalletts (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

EmiMonkey (F1)

Emma (F1)

Emmaloid (F1)

Empress (F1)

Enby (F1)

Eradicator (F1)

Estave1 (F1)

Fancypants (F1)

Fastidio (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

FreddyB (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

GigiOuiOui (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

Grimmer (F1)

GUmbie (F1)

Guppsters (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

IbOuu (F1)

IMpilo (F1)

Inventum (F1)

IrishSherpFalk (F1)

JalFarm20 (F1)

James (F1)

Jant (F1)

Jarcob (F1)

Jinglebell (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Juniper1 (F1)

Karhdo (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingJulian (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

Leozinho (F1)

Leperchaun (F1)

LilMoolah (F1)

LittleShirley (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

LunaBlu (F1)

Madiba (F1)

MadMen (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Maravista (F1)

Marker (F1)

Martik (F1)

Mattes (F1)

Medindi (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Ms6 (F1)

MulchExplorer (F1)

Mutaforma13 (F1)

Mwanjiwa (F1)

NewHope4 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

Oksu (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Peridot (F1)

Phalconet (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

PhesterPhotato (F1)

Philus (F1)

PhlipPhlop (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

Polo2Bam (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Radiance (F1)

Ramsey (F1)

RedBird (F1)

Rialto (F1)

Rita (F1)

RitaG (F1)

Rockne (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sabbb (F1)

Sandalphon (F1)

Sarma624 (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

ShowerHandel (F1)

ShroomBoi (F1)

SimranZ1 (F1)

SiSi (F1)

Slim (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Stap (F1)

Starcevich (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

Tchotchke (F1)

TDanisky (F1)

TootsiePop (F1)

Tootsieroll (F1)

Topiatin (F1)

Totinger (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

Violac (F1)

Vivum (F1)

VRedHorse (F1)

Wachhund (F1)

Wee (F1)

Whatsapiecost (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Yorick (F1)

Zerg (F1)

Zizzle (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

SilverChicken (F2)

Soul22 (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

LunaStella (F4)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Toron (F6)

MulchSalad (F7)

Annotating InstitutionBrigham Young University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes108
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Emmaloid_1
(HNH endonuclease)

Emmaloid_2
(terminase, small subunit)

Emmaloid_3
(terminase, large subunit)

Emmaloid_4
(portal protein)

Emmaloid_5
(capsid maturation protease)

Emmaloid_6
(scaffolding protein)

Emmaloid_7
(major capsid protein)

Emmaloid_8
(head-to-tail adaptor)

Emmaloid_9
(head-to-tail stopper)

Emmaloid_10
(minor tail protein)

Emmaloid_11
(tail terminator)

Emmaloid_12
(major tail protein)

Emmaloid_13
(tail assembly chaperone)

Emmaloid_14
(tail assembly chaperone)

Emmaloid_15
(tape measure protein)

Emmaloid_16
(minor tail protein)

Emmaloid_17
(minor tail protein)

Emmaloid_18
(minor tail protein)

Emmaloid_19
(tailspike protein)

Emmaloid_20
(minor tail protein, D-ala-D-ala carboxypeptidase)

Emmaloid_21
(minor tail protein)

Emmaloid_22
(minor tail protein)

Emmaloid_23

Emmaloid_24
(minor tail protein)

Emmaloid_25
(minor tail protein)

Emmaloid_26

Emmaloid_27
(secreted protein)

Emmaloid_28

Emmaloid_29

Emmaloid_30
(transposase)

Emmaloid_31

Emmaloid_32
(lysin A)

Emmaloid_33
(lysin B)

Emmaloid_34
(holin)

Emmaloid_35

Emmaloid_36

Emmaloid_37
(DnaQ-like (DNA polymerase III subunit))

Emmaloid_38

Emmaloid_39

Emmaloid_40

Emmaloid_41

Emmaloid_42

Emmaloid_43

Emmaloid_44
(tyrosine integrase)

Emmaloid_45
(secreted protein)

Emmaloid_46
(immunity repressor)

Emmaloid_47
(Cro (control of repressor)

Emmaloid_48
(antirepressor)

Emmaloid_49

Emmaloid_50

Emmaloid_51
(excise)

Emmaloid_52

Emmaloid_53

Emmaloid_54

Emmaloid_55

Emmaloid_56

Emmaloid_57
(secreted protein)

Emmaloid_58
(WhiB family transcription factor)

Emmaloid_59

Emmaloid_60
(WhiB family transcription factor)

Emmaloid_61
(helix-turn-helix DNA binding domain)

Emmaloid_62

Emmaloid_63

Emmaloid_64

Emmaloid_65
(HNH endonuclease)

Emmaloid_66
(DNA break repair protein)

Emmaloid_67
(HNH endonuclease)

Emmaloid_68
(DNA methyltransferase)

Emmaloid_69

Emmaloid_70

Emmaloid_71

Emmaloid_72

Emmaloid_73

Emmaloid_74

Emmaloid_75

Emmaloid_76

Emmaloid_77

Emmaloid_78

Emmaloid_79
(helicase loader)

Emmaloid_80

Emmaloid_81

Emmaloid_82

Emmaloid_83

Emmaloid_84

Emmaloid_85
(mycobacteriophage mobile element 1 (MPME 1))

Emmaloid_86

Emmaloid_87
(DNA-directed RNA polymerase subunit P)

Emmaloid_88

Emmaloid_89

Emmaloid_90
(histidine triad nucleotide binding protein)

Emmaloid_91

Emmaloid_92

Emmaloid_93

Emmaloid_94

Emmaloid_95

Emmaloid_96

Emmaloid_97
(helix-turn-helix DNA binding domain, MerR-like)

Emmaloid_98

Emmaloid_99

Emmaloid_100

Emmaloid_101

Emmaloid_102

Emmaloid_103

Emmaloid_104

Emmaloid_105
(glycosyltransferase)

Emmaloid_106
(serine/threonine kinase)

Emmaloid_107
(RNA binding protein)

Emmaloid_108
(glycosyltransferase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPX121515
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 209
Pitt Freezer Box Grid# A4
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload