Detailed Information for Phage Galactic |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Cayley Johnson |
Year Found | 2016 |
Location Found | Cullowhee, NC USA |
Finding Institution | Western Carolina University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 35.2919 N, 83.18658 W Map |
Discovery Notes | Dry, dark soil. Chicken coop compost. Phage Enzyme tool predicts A1 or F1 cluster |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 15, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1402 |
Genome length (bp) | 57861 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGAAGGCGC |
GC Content | 61.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Western Carolina University |
Annotation Status | In GenBank |
Plaque Notes | Small lytic plaques were form that were approximately 1mm in diameter. |
Morphotype | Siphoviridae |
Number of Genes | 109 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH727548 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
43 |
Pitt Freezer Box Grid# |
F7 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |