Detailed Information for Phage Guppsters |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | maggie lamppa |
Year Found | 2023 |
Location Found | Duluth, MN United States |
Finding Institution | College of St. Scholastica |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 37°C |
GPS Coordinates | 46.816111 N, 92.104444 W Map |
Discovery Notes | Was discovered on the rooftop of our science facility. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 15, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1026 |
Genome length (bp) | 54835 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGTAGGCGC |
GC Content | 61.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | College of St. Scholastica |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 99 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP978892 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
182 |
Pitt Freezer Box Grid# |
D4 |
Available Files |
GenBank File for Phamerator | Download |