| Detailed Information for Phage Hlubikazi |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Duplicates of this Phage | Indoni |
| Found By | Awonke Makholwa |
| Year Found | 2018 |
| Location Found | Durban, South Africa |
| Finding Institution | University of Kwazulu-Natal |
| Program | Mycobacterial Genetics Course, Durban, South Africa |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 29.865299 S, 30.984579 E Map |
| Discovery Notes | University of Kwa-Zulu Natal, Westville campus between the H Joosub Hall and the Library building but closer to the library building. |
| Naming Notes | The amaHlubi are a South African ethnic group. For at least two centuries they have been a part of the Nguni, Mbo or Lala nation. They are found in the Republic of South Africa in the KwaZulu-Natal, Eastern Cape and North West provinces. a child named afater the amaHlubi tribe is Hlubi(male) and Hubikazi(female). |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 26, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 658 |
| Genome length (bp) | 55471 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGACGGCGC |
| GC Content | 61.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | F |
| Subcluster | F1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of Kwazulu-Natal |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 102 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT684601 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| Available Files |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
