Detailed Information for Phage IbOuu |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Adjia Seynabou Sy Gueye |
Year Found | 2023 |
Location Found | Ottawa, Canada |
Finding Institution | University of Ottawa |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 45.420091 N, 75.687616 W Map |
Discovery Notes | This phage was found in a potted plant in my living room. The plant is a Phylodendron micans planted in August 2023. Since then, it was watered weekly and received plenty of sun. The soil is a homemade mix of worm and plant compost. |
Naming Notes | This phage was named after my beloved older brother who is to my life what this phage is to M. smegmatis. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 6, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 333 |
Genome length (bp) | 55297 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGACGGCGC |
GC Content | 61.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | Planless |
Morphotype | Siphoviridae |
Number of Genes | 102 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
176 |
Pitt Freezer Box Grid# |
D5 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |