| Detailed Information for Phage Jinglebell |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Maria-Lainie Galdo |
| Year Found | 2023 |
| Location Found | Huntingdon Valley, PA United States |
| Finding Institution | Saint Joseph's University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 37°C |
| GPS Coordinates | 40.148803 N, 75.043568 W Map |
| Discovery Notes | The soil was collected near a water drain on the sidewalk with heavy foot traffic. Many people and animals walk on the soil each day as it is from a suburban area. The area was dry. |
| Naming Notes | My partner and I love Christmas so we picked a name that was holiday themed. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 12, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1289 |
| Genome length (bp) | 58829 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGATGGCGC |
| GC Content | 61.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | F |
| Subcluster | F1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Saint Joseph's University |
| Annotation Status | In GenBank |
| Plaque Notes | Cloudy plaques, the length of incubation was 48 hours, and the average size of plaques was .5mm. MTL is 4.4 * 109 pfu/mL
. HTL is 1.02 * 109 pfu/mL |
| Morphotype | Siphoviridae |
| Number of Genes | 111 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PP978801 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
186 |
| Pitt Freezer Box Grid# |
H9 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
