Detailed Information for Phage Leozinho |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Leonardo Venturotti |
Year Found | 2020 |
Location Found | Melrose, MA USA |
Finding Institution | Merrimack College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 21°C |
GPS Coordinates | 42.451111 N, 71.076389 W Map |
Discovery Notes | Soil collected from the bottom of a food composting bin. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 20, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2368 |
Genome length (bp) | 54280 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CCGATGGCAT |
GC Content | 61.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Merrimack College |
Annotation Status | In GenBank |
Plaque Notes | Large plaques with a clear center, hazy edge. |
Morphotype | Siphoviridae |
Number of Genes | 99 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | ON970566 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
124 |
Pitt Freezer Box Grid# |
G3 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |