Detailed Information for Phage Lizziana |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Rhode Dorissaint |
Year Found | 2017 |
Location Found | Port Saint Lucie, FL USA |
Finding Institution | Indian River State College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 27.3147 N, 80.4016 W Map |
Naming Notes | Named after my niece Ariana Elizabeth (Lizzy) |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 20, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1804 |
Genome length (bp) | 58423 |
Character of genome ends | Unknown |
Overhang Length | 10 bases |
Overhang Sequence | CGGACGGCGC |
GC Content | 61.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Indian River State College |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 105 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH834617 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
55 |
Pitt Freezer Box Grid# |
B3 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
GenBank File for Phamerator | Download |