Detailed Information for Phage MadMen |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Former names | MandMz |
Found By | Madison Mendez |
Year Found | 2020 |
Location Found | Williamsburg, VA USA |
Finding Institution | College of William & Mary |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 22°C |
GPS Coordinates | 37.2719 N, 76.7165 W Map |
Discovery Notes | I collected this sample on one of the trails in between the ISC and Sadler center. It was near a little creek with the small bridge. |
Naming Notes | The first three letters of my first and last name are "Mad" and "Men." |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 7, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 14 |
Genome length (bp) | 57759 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGAAGGCGC |
GC Content | 61.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | College of William & Mary |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 109 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ747512 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
121 |
Pitt Freezer Box Grid# |
B9 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |