The Actinobacteriophage Database | Phage MilleniumForce

Mycobacterium phage MilleniumForce

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Detailed Information for Phage MilleniumForce
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Paul Zakaria
Year Found	2012
Location Found	West Lafayette, IN USA
Finding Institution	Purdue University
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	No
Isolation Temperature	Not entered
GPS Coordinates	40.426 N, 86.933 W Map
Discovery Notes	Soil Moist. Dug 10cm deep in this location. Directly under tree.
Naming Notes	Name of an old friend.
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jun 13, 2013
Sequencing Facility	Purdue Genomics Facility
Shotgun Sequencing Method	Illumina Sequencing
Approximate Shotgun Coverage	447
Genome length (bp)	58106
Character of genome ends	3' Sticky Overhang
Overhang Length	10 bases
Overhang Sequence	CGGACGGCGC
GC Content	61.8%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	F
Subcluster	F1
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View Blarby (None) MulchSalad (None) Akhila (F1) Alexphander (F1) AlpineSix (F1) ArcusAngelus (F1) Ardmore (F1) Aubs (F1) Awesomesauce (F1) Batiatus (F1) Beakin (F1) BigPhil (F1) Bipolar (F1) Blexus (F1) BlueCrab (F1) BobaPhett (F1) Bobi (F1) BodEinwohner17 (F1) Boomer (F1) Brocalys (F1) Bubbles123 (F1) Burwell21 (F1) BuzzLyseyear (F1) ByChance (F1) Byougenkin (F1) Cabrinians (F1) CaptainTrips (F1) Cerasum (F1) Che8 (F1) Chevrolet (F1) ChickenDinner (F1) Chuckly (F1) Clifton (F1) Coco12 (F1) Cornucopia (F1) Crumble (F1) DaddyRickover (F1) Daenerys (F1) Dante (F1) DaWorst (F1) DeadP (F1) Deb65 (F1) DillTech15 (F1) DirtMcgirt (F1) DLane (F1) DocMcStuffins (F1) Donkeykong (F1) Doomphist (F1) Dorothy (F1) DosHalletts (F1) DotProduct (F1) Doug (F1) Drago (F1) DRBy19 (F1) Eish (F1) EleanorGeorge (F1) Emma (F1) Empress (F1) Enby (F1) Eradicator (F1) Estave1 (F1) Fancypants (F1) Fastidio (F1) Filuzino (F1) Firehouse51 (F1) Flathead (F1) Florinda (F1) Frankie (F1) FreddyB (F1) Fruitloop (F1) Galactic (F1) Gandalph (F1) Geralt (F1) GigiOuiOui (F1) Girafales (F1) Girr (F1) Gorge (F1) GUmbie (F1) Guppsters (F1) Hades (F1) Hamulus (F1) Harley (F1) Hegedechwinu (F1) Hlubikazi (F1) Ibhubesi (F1) IbOuu (F1) IMpilo (F1) Inventum (F1) IrishSherpFalk (F1) JalFarm20 (F1) James (F1) Jarcob (F1) Jinglebell (F1) Job42 (F1) JoeyJr (F1) Juice456 (F1) Juniper1 (F1) Karhdo (F1) Kenuha5 (F1) Kersh (F1) Kimberlium (F1) KingMidas (F1) Kingsley (F1) Koella (F1) Krakatau (F1) KristaRAM (F1) LastJedi (F1) Latretium (F1) Leozinho (F1) Leperchaun (F1) LilMoolah (F1) LittleShirley (F1) Lizziana (F1) Llama (F1) Llij (F1) Lorde (F1) LunaBlu (F1) Madiba (F1) MadMen (F1) Mahavrat (F1) Mandlovu (F1) Mantra (F1) Maravista (F1) Marker (F1) Martik (F1) Mattes (F1) Melissauren88 (F1) MilanaBonita (F1) MilleniumForce (F1) MinionDave (F1) Minnie (F1) Misha28 (F1) MisterCuddles (F1) Modragons (F1) Moonbeam (F1) Mova (F1) Mozy (F1) Ms6 (F1) MulchExplorer (F1) Mutaforma13 (F1) Nimbo (F1) Nitzel (F1) Nivrat (F1) NormanBulbieJr (F1) Ochi17 (F1) OfUltron (F1) Ogopogo (F1) Oksu (F1) OldBen (F1) OlympiaSaint (F1) Ovechkin (F1) OwlsT2W (F1) Pacc40 (F1) Phalconet (F1) Phanphagia (F1) PHappiness (F1) Phasih (F1) Phatniss (F1) PhesterPhotato (F1) Philus (F1) Piper2020 (F1) Pippy (F1) Plumbus (F1) PMC (F1) Poenanya (F1) Polka14 (F1) Pollywog (F1) PopTart (F1) Priscilla (F1) QuickMath (F1) Quico (F1) Radiance (F1) Ramsey (F1) RedBird (F1) Rialto (F1) Rita (F1) RitaG (F1) Rockne (F1) RockyHorror (F1) Royals2015 (F1) Ruby (F1) Saal (F1) Sabbb (F1) Sandalphon (F1) Sarma624 (F1) Sassafras (F1) SassyB (F1) Scottish (F1) Seabastian (F1) Seagreen (F1) SG4 (F1) Shauna1 (F1) ShiLan (F1) ShowerHandel (F1) ShroomBoi (F1) SimranZ1 (F1) SiSi (F1) Sparkdehlily (F1) Spartacus (F1) Spikelee (F1) Spoonbill (F1) StAnnes (F1) Stap (F1) Starcevich (F1) Strokeseat (F1) SuperGrey (F1) SwagPigglett (F1) Taj (F1) TDanisky (F1) TootsiePop (F1) Tootsieroll (F1) Totinger (F1) Tweety (F1) UncleRicky (F1) Velveteen (F1) Veteran (F1) VRedHorse (F1) Wachhund (F1) Wee (F1) Whatsapiecost (F1) Whouxphf (F1) WillSterrel (F1) XFactor (F1) Yorick (F1) Zerg (F1) Zizzle (F1) Avani (F2) Che9d (F2) Demsculpinboyz (F2) Jabbawokkie (F2) Soul22 (F2) Yoshi (F2) Zapner (F2) Squirty (F3) LunaStella (F4) Renaud18 (F4) TChen (F4) ThetaBob (F4) Cornie (F5) Toron (F6)
Annotating Institution	Purdue University
Annotation Status	In GenBank
Plaque Notes	Plaques appear to be standard. Roughly 3mm in diameter at 48hrs.
Morphotype	Siphoviridae
Number of Genes	104
Number of tRNAs	0
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View MilleniumForce_1 MilleniumForce_2 (terminase small subunit) MilleniumForce_3 (terminase large subunit) MilleniumForce_4 (portal protein) MilleniumForce_5 (capsid maturation protease) MilleniumForce_6 (scaffolding protein) MilleniumForce_7 (major capsid protein) MilleniumForce_8 (head-to-tail adaptor) MilleniumForce_9 (head-to-tail stopper) MilleniumForce_10 MilleniumForce_11 (tail terminator) MilleniumForce_12 (major tail protein) MilleniumForce_13 (tail assembly chaperone) MilleniumForce_14 (tail assembly chaperone) MilleniumForce_15 (tape measure protein) MilleniumForce_16 (minor tail protein) MilleniumForce_17 (minor tail protein) MilleniumForce_18 MilleniumForce_19 (minor tail protein) MilleniumForce_20 (D-ala-D-ala carboxypeptidase) MilleniumForce_21 (minor tail protein) MilleniumForce_22 MilleniumForce_23 MilleniumForce_24 MilleniumForce_25 MilleniumForce_26 (helix-turn-helix DNA binding domain protein) MilleniumForce_27 MilleniumForce_28 MilleniumForce_29 MilleniumForce_30 MilleniumForce_31 (lysin A) MilleniumForce_32 (lysin B) MilleniumForce_33 MilleniumForce_34 MilleniumForce_35 MilleniumForce_36 (DnaQ-like DNA polymerase III subunit) MilleniumForce_37 MilleniumForce_38 MilleniumForce_39 MilleniumForce_40 (helix-turn-helix DNA-binding domain protein) MilleniumForce_41 MilleniumForce_42 (integrase) MilleniumForce_43 MilleniumForce_44 (immunity repressor) MilleniumForce_45 (CRO protein) MilleniumForce_46 (antirepressor) MilleniumForce_47 MilleniumForce_48 MilleniumForce_49 MilleniumForce_50 (helix-turn-helix DNA-binding domain protein) MilleniumForce_51 MilleniumForce_52 MilleniumForce_53 MilleniumForce_54 MilleniumForce_55 MilleniumForce_56 MilleniumForce_57 MilleniumForce_58 MilleniumForce_59 MilleniumForce_60 MilleniumForce_61 (WhiB family transcription factor) MilleniumForce_62 MilleniumForce_63 (helix-turn-helix DNA-binding domain protein) MilleniumForce_64 MilleniumForce_65 MilleniumForce_66 MilleniumForce_67 MilleniumForce_68 (HNH endonuclease) MilleniumForce_69 MilleniumForce_70 (methyltransferase) MilleniumForce_71 MilleniumForce_72 MilleniumForce_73 MilleniumForce_74 MilleniumForce_75 MilleniumForce_76 MilleniumForce_77 MilleniumForce_78 MilleniumForce_79 MilleniumForce_80 MilleniumForce_81 MilleniumForce_82 MilleniumForce_83 MilleniumForce_84 MilleniumForce_85 MilleniumForce_86 MilleniumForce_87 MilleniumForce_88 MilleniumForce_89 MilleniumForce_90 MilleniumForce_91 MilleniumForce_92 MilleniumForce_93 MilleniumForce_94 (MerR-like HTH DNA binding protein) MilleniumForce_95 MilleniumForce_96 MilleniumForce_97 MilleniumForce_98 MilleniumForce_99 MilleniumForce_100 MilleniumForce_101 (glycosyltransferase) MilleniumForce_102 (serine/threonine kinase) MilleniumForce_103 MilleniumForce_104 (glycosyltransferase)
Submitted Annotation in DNA Master Format	Download
Submitted Minimal DNA Master File	Download
Author List	Download
Annotation Cover Sheet	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	MH825707
Refseq Number	None yet
Published in Paper	Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	39
Pitt Freezer Box Grid#	65
Available Files
Plaque Picture	Download
EM Picture	Download
GenBank File for Phamerator	Download

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