Detailed Information for Phage Modragons |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Barisornu Kaangbaric and Deanna Meyer |
Year Found | 2017 |
Location Found | St. Louis, MO USA |
Finding Institution | St. Louis Community College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 38.5683 N, 90.4186 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 3, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1655 |
Genome length (bp) | 58461 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGATGGCGC |
GC Content | 61.1% |
Sequencing Notes | at position 18634 bp approximately 30% of reads contain an A instead of consensus C
at position 19951 bp approximately 25% of reads contain an T instead of consensus C
approximately 25% of population contains a 1856 bp deletion on consensus 49122 to 50977, inclusive |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | St. Louis Community College |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 107 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN428051 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
50 |
Pitt Freezer Box Grid# |
E10 |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |